RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 REPS2Q8NFH8 660 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
VARS-219ENST00000461328 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 MMP19Q99542 508 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 H0YGN5 161 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 NMT2O60551 498 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 ZBED4O75132 1171 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 PCP11498 1178 aaKnown RBP18.16■□□□□ 0.5
VARS-219ENST00000461328 BMP3P12645 472 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 CNGA1P29973 690 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 KCTD2Q14681 263 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
VARS-219ENST00000461328 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 NBPF3Q9H094 633 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 MTMR7Q9Y216 660 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
VARS-219ENST00000461328 CHMLP26374 656 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
VARS-219ENST00000461328 SNRNP48Q6IEG0 339 aaKnown RBP18.15■□□□□ 0.5
VARS-219ENST00000461328 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 GMCL1Q96IK5 515 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 IL25Q9H293 177 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 IL17RBQ9NRM6 502 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 NR2E3Q9Y5X4 410 aa18.15■□□□□ 0.5
VARS-219ENST00000461328 EVI5O60447 810 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 MSCO60682 206 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 FGRP09769 529 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 SLC1A4P43007 532 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 LHX8Q68G74 356 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 ESR2Q92731 530 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 MAML3Q96JK9 1138 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 DDX20Q9UHI6 824 aaKnown RBP18.14■□□□□ 0.49
VARS-219ENST00000461328 NEDD4P46934 1319 aa18.14■□□□□ 0.49
VARS-219ENST00000461328 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
VARS-219ENST00000461328 PGK2P07205 417 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 CYBAP13498 195 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 MCCP23508 829 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 STAT2P52630 851 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
VARS-219ENST00000461328 RAVER2Q9HCJ3 691 aaKnown RBP18.13■□□□□ 0.49
VARS-219ENST00000461328 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 IGHA2P01877 340 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 MNX1P50219 401 aaPredicted RBP18.12■□□□□ 0.49
VARS-219ENST00000461328 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 TRPV1Q8NER1 839 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 RIPK3Q9Y572 518 aa18.12■□□□□ 0.49
VARS-219ENST00000461328 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
VARS-219ENST00000461328 FDX1P10109 184 aa18.11■□□□□ 0.49
VARS-219ENST00000461328 OAZ1P54368 228 aa18.11■□□□□ 0.49
VARS-219ENST00000461328 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
VARS-219ENST00000461328 DDX11Q96FC9 970 aa18.11■□□□□ 0.49
VARS-219ENST00000461328 B4E1Z4 1266 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 SGSM2O43147 1006 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 KDM4AO75164 1064 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 TOP1P11387 765 aaKnown RBP18.1■□□□□ 0.49
VARS-219ENST00000461328 NOVP48745 357 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 ZNF792Q3KQV3 632 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 RCSD1Q6JBY9 416 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 IQCA1Q86XH1 822 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 ZKSCAN3Q9BRR0 538 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
VARS-219ENST00000461328 DIS3Q9Y2L1 958 aaKnown RBP18.1■□□□□ 0.49
VARS-219ENST00000461328 SEPT4O43236 478 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 NT5C2P49902 561 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 HABP4Q5JVS0 413 aaKnown RBP18.09■□□□□ 0.49
VARS-219ENST00000461328 PRAMEF19Q5SWL8 479 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 DCAF4Q8WV16 495 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 TMEM47Q9BQJ4 181 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 KRT23Q9C075 422 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 CNNM2Q9H8M5 875 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
VARS-219ENST00000461328 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
VARS-219ENST00000461328 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
VARS-219ENST00000461328 PFASO15067 1338 aa18.08■□□□□ 0.49
VARS-219ENST00000461328 PLA2G6O60733 806 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 PTH1RQ03431 593 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 BMP2KLQ5H9B9 411 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 ANO1Q5XXA6 986 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 C7orf61Q8IZ16 206 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 ANKRD35Q8N283 1001 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 CHST13Q8NET6 341 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 TINF2Q9BSI4 451 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 HOMER2Q9NSB8 354 aa18.08■□□□□ 0.48
VARS-219ENST00000461328 ZNFX1Q9P2E3 1918 aaKnown RBP18.08■□□□□ 0.48
VARS-219ENST00000461328 FRMPD2Q68DX3 1309 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms