RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TTI1O43156 1089 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 CFBP00751 764 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 TUBB6Q9BUF5 446 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 METTL14Q9HCE5 456 aaKnown RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 EFCAB8A8MWE9 144 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 TOM1O60784 492 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 INHBAP08476 426 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 ABCB4P21439 1286 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 CASP2P42575 452 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 AOC3Q16853 763 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 USH1GQ495M9 461 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 GPBP1Q86WP2 473 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 TPH2Q8IWU9 490 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 SLFN12Q8IYM2 578 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 SKA2Q8WVK7 121 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 CCDC138Q96M89 665 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 CDK13Q14004 1512 aaKnown RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 A6NJR5 290 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 IQCB1Q15051 598 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 FAM102BQ5T8I3 360 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 TMTC3Q6ZXV5 915 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 NME8Q8N427 588 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 CHURC1Q8WUH1 139 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 GLG1Q92896 1179 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 XAGE2Q96GT9 111 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 HAUS4Q9H6D7 363 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 AS3MTQ9HBK9 375 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 ZFYVE9O95405 1425 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 GSTA4O15217 222 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 CYP2J2P51589 502 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 MORC3Q14149 939 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 ZYXQ15942 572 aaKnown RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 ZC3H15Q8WU90 426 aaKnown RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 FAM193BQ96PV7 902 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 RLBP1P12271 317 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 LRCH2Q5VUJ6 765 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 C4orf50Q6ZRC1 276 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 TRIML1Q8N9V2 468 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 CCDC197Q8NCU1 140 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 SPATS2LQ9NUQ6 558 aaKnown RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 SH3TC1Q8TE82 1336 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 TYW5A2RUC4 315 aaKnown RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 CLTAP09496 248 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 KRT10P13645 584 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 YWHAGP61981 247 aaKnown RBP eCLIP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 BCAS4Q8TDM0 211 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 MORC4Q8TE76 937 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 NRBF2Q96F24 287 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 BLZF1Q9H2G9 400 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 DPH5Q9H2P9 285 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 ZBTB40Q9NUA8 1239 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 HNRNPCL2B2RXH8 293 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 HNRNPCL1O60812 293 aaKnown RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 PDE1BQ01064 536 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 TCIRG1Q13488 830 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 PPP1R2P3Q6NXS1 205 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 TRIM11Q96F44 468 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 TTC1Q99614 292 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 ARMCX3Q9UH62 379 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 MAD1L1Q9Y6D9 718 aa9.83□□□□□ -0.84
BRCA1-205ENST00000461221 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-205ENST00000461221 BPIFB4P59827 614 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 CPXCR1Q8N123 301 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 FBXO41Q8TF61 875 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 NCOA5Q9HCD5 579 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 PACSIN2Q9UNF0 486 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 H7C0C1 242 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 H2AFZP0C0S5 128 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 XPAP23025 273 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ATP5OP48047 213 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 PPARDQ03181 441 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 H2AFVQ71UI9 128 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 TBC1D22AQ8WUA7 517 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 MMS19Q96T76 1030 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ARPP21Q9UBL0 812 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF148Q9UQR1 794 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 GNPATO15228 680 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 VAMP4O75379 141 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 CPA1P15085 419 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SAT1P21673 171 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 PTPREP23469 700 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ATP1A2P50993 1020 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 RAPH1Q70E73 1250 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SLC17A8Q8NDX2 589 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 XPO4Q9C0E2 1151 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 MLXIPQ9HAP2 919 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SCINQ9Y6U3 715 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 KDRP35968 1356 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 TNRQ92752 1358 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms