RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 TTLL1O95922 423 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 PDHBP11177 359 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 MARCKSP29966 332 aaPredicted RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 IQCB1Q15051 598 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 STX1AQ16623 288 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 ZMYND12Q9H0C1 365 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 NOL7Q9UMY1 257 aaKnown RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 STXBP3O00186 592 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 SYKP43405 635 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 NLRP5P59047 1200 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 ANO6Q4KMQ2 910 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 ZFPM1Q8IX07 1006 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 MTMR8Q96EF0 704 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 ZBED3Q96IU2 234 aaPredicted RBP12.45□□□□□ -0.42
IFT88-204ENST00000461115 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 CBX8Q9HC52 389 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
IFT88-204ENST00000461115 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
IFT88-204ENST00000461115 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
IFT88-204ENST00000461115 ZNF543Q08ER8 600 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 CFAP100Q494V2 611 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 TTC38Q5R3I4 469 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
IFT88-204ENST00000461115 NT5DC1Q5TFE4 455 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 ARL6IP4Q66PJ3 421 aaKnown RBP12.44□□□□□ -0.42
IFT88-204ENST00000461115 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 CCDC12Q8WUD4 166 aaPredicted RBP12.44□□□□□ -0.42
IFT88-204ENST00000461115 CLIC6Q96NY7 704 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
IFT88-204ENST00000461115 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 ZNF165P49910 485 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 ORC2Q13416 577 aaPredicted RBP12.43□□□□□ -0.42
IFT88-204ENST00000461115 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
IFT88-204ENST00000461115 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 SPATA20Q8TB22 786 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 RRP36Q96EU6 259 aaKnown RBP12.43□□□□□ -0.42
IFT88-204ENST00000461115 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
IFT88-204ENST00000461115 SDF4Q9BRK5 362 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 FAM13BQ9NYF5 915 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 ZNRF3Q9ULT6 936 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 PCDHAC2Q9Y5I4 1007 aa12.43□□□□□ -0.42
IFT88-204ENST00000461115 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 AP5Z1O43299 807 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 GRIN1Q05586 938 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 SARM1Q6SZW1 724 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 FAM151AQ8WW52 585 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
IFT88-204ENST00000461115 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
IFT88-204ENST00000461115 PSMD14O00487 310 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 LAD1O00515 517 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 WNT7AO00755 349 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 ADAMTS3O15072 1205 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 TBC1D12O60347 775 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 ADCY5O95622 1261 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 GNA11P29992 359 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
IFT88-204ENST00000461115 NLRP12P59046 1061 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 MAP3K10Q02779 954 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 NOM1Q5C9Z4 860 aaKnown RBP12.41□□□□□ -0.42
IFT88-204ENST00000461115 KANK3Q6NY19 840 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 TMEM179Q6ZVK1 233 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
IFT88-204ENST00000461115 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 PGAP2Q9UHJ9 254 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 HERC5Q9UII4 1024 aaKnown RBP12.41□□□□□ -0.42
IFT88-204ENST00000461115 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
IFT88-204ENST00000461115 ESPNB1AK53 854 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 GOLGA8HP0CJ92 632 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 PRPHP41219 470 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 LONRF3Q496Y0 759 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
IFT88-204ENST00000461115 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
IFT88-204ENST00000461115 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 FAM83AQ86UY5 434 aa12.4□□□□□ -0.42
IFT88-204ENST00000461115 LUZP1Q86V48 1076 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms