RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
CSDC2-202ENST00000460790 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 PIBF1Q8WXW3 757 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 CLMNQ96JQ2 1002 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 ELP3Q9H9T3 547 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
CSDC2-202ENST00000460790 GBA2Q9HCG7 927 aaPredicted RBP12.59□□□□□ -0.39
CSDC2-202ENST00000460790 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 CXCL11O14625 94 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.4
CSDC2-202ENST00000460790 STAT2P52630 851 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
CSDC2-202ENST00000460790 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 SHISA4Q96DD7 197 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
CSDC2-202ENST00000460790 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
CSDC2-202ENST00000460790 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
CSDC2-202ENST00000460790 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
CSDC2-202ENST00000460790 MYH15Q9Y2K3 1946 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 hCG_1984214I3L0E3 225 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 KIF3CO14782 793 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 ZBTB5O15062 677 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 MMP1P03956 469 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 VCAM1P19320 739 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 HMGCS2P54868 508 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
CSDC2-202ENST00000460790 RESTQ13127 1097 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 PPIL2Q13356 520 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 DGKZQ13574 1117 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 CST9Q5W186 159 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 ZNF713Q8N859 430 aaPredicted RBP12.57□□□□□ -0.4
CSDC2-202ENST00000460790 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 VPS54Q9P1Q0 977 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 KCNH4Q9UQ05 1017 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
CSDC2-202ENST00000460790 RLFQ13129 1914 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 STXBP3O00186 592 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 IRF6O14896 467 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 MCTP1Q6DN14 999 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 FERMT3Q86UX7 667 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 OPTNQ96CV9 577 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 TMOD4Q9NZQ9 345 aa12.56□□□□□ -0.4
CSDC2-202ENST00000460790 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
CSDC2-202ENST00000460790 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 NLRP5P59047 1200 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 NPY5RQ15761 445 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 GALNT17Q6IS24 598 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 HEATR3Q7Z4Q2 680 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 RANBP17Q9H2T7 1088 aaKnown RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
CSDC2-202ENST00000460790 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
CSDC2-202ENST00000460790 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 BTBD18B2RXH4 712 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 CALML3P27482 149 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 GJA5P36382 358 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 NAPAP54920 295 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 COG2Q14746 738 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 CATSPERGQ6ZRH7 1159 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 BRAPQ7Z569 592 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 DIS3L2Q8IYB7 885 aaKnown RBP12.54□□□□□ -0.4
CSDC2-202ENST00000460790 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
CSDC2-202ENST00000460790 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 COA7Q96BR5 231 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 PASKQ96RG2 1323 aa12.54□□□□□ -0.4
CSDC2-202ENST00000460790 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms