RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 MAPK4P31152 587 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ERVK-24P63145 666 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TRDNQ13061 729 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SLC9C1Q4G0N8 1177 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 NBPF11Q86T75 865 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 IQCA1Q86XH1 822 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RAET1EQ8TD07 263 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TRIM47Q96LD4 638 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 KRT23Q9C075 422 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ARHGAP39Q9C0H5 1083 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SRRDQ9UH36 339 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.46
HLA-DQB1-207ENST00000460185 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 F5H6K3 240 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 KLRC3Q07444 240 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SOCS4Q8WXH5 440 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 MKL1Q969V6 931 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NEDD4P46934 1319 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 HTTP42858 3142 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NDUFB10O96000 172 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 FAM83BQ5T0W9 1011 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SLF1Q9BQI6 1058 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PTCH2Q9Y6C5 1203 aa12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 BMP3P12645 472 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 COPB2P35606 906 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PBX2P40425 430 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SLC1A4P43007 532 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PRKCZQ05513 592 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SLFN13Q68D06 897 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TTC14Q96N46 770 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 IL25Q9H293 177 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
HLA-DQB1-207ENST00000460185 KDM4AO75164 1064 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 FDX1P10109 184 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 FLT3LGP49771 235 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 STAT2P52630 851 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 UBXN2AP68543 259 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 IRF5Q13568 498 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PLS1Q14651 629 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SART3Q15020 963 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 KIAA1755Q5JYT7 1200 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 FAM160B2Q86V87 743 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PRPF38AQ8NAV1 312 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ATG4CQ96DT6 458 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SPATC1LQ9H0A9 340 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TXNRD2Q9NNW7 524 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 FEM1BQ9UK73 627 aa12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ERICH2A1L162 156 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 B4E1Z4 1266 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NMT2O60551 498 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 CTGFP29279 349 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 GRK4P32298 578 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 GPR142Q7Z601 462 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 PLEKHH3Q7Z736 793 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 DGKHQ86XP1 1220 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 SHCBP1Q8NEM2 672 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 CHURC1Q8WUH1 139 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 ARMC5Q96C12 935 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 NUP88Q99567 741 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 MROH8Q9H579 483 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 BIN2Q9UBW5 565 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-207ENST00000460185 TNKSO95271 1327 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms