RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 CHST13Q8NET6 341 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 MMP19Q99542 508 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 PRO3102Q9H379 93 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 SLC38A10Q9HBR0 1119 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 FBXO28Q9NVF7 368 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 TSPY2A6NKD2 308 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 DNM1LO00429 736 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 COBLO75128 1261 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 PRDM1O75626 825 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 FGAP02671 866 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 HSPD1P10809 573 aaKnown RBP11.85□□□□□ -0.51
HDLBP-228ENST00000459788 ZNF792Q3KQV3 632 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 SLFN13Q68D06 897 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 EXOC6Q8TAG9 804 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-228ENST00000459788 PNMA2Q9UL42 364 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-228ENST00000459788 CTDP1Q9Y5B0 961 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-228ENST00000459788 SYNGAP1Q96PV0 1343 aa11.85□□□□□ -0.51
HDLBP-228ENST00000459788 DNAH12Q6ZR08 3092 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 RAD21O60216 631 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 IGHDP01880 384 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 SDSP20132 328 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 CYP2C19P33261 490 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 BMP8BP34820 402 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 STAT2P52630 851 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 CCDC178Q5BJE1 867 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
HDLBP-228ENST00000459788 MAMDC4Q6UXC1 1216 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
HDLBP-228ENST00000459788 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 TTC14Q96N46 770 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 TINF2Q9BSI4 451 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 MYH6P13533 1939 aa11.84□□□□□ -0.51
HDLBP-228ENST00000459788 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 RANBP6O60518 1105 aaKnown RBP11.83□□□□□ -0.52
HDLBP-228ENST00000459788 SLC1A4P43007 532 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 NMIQ13287 307 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-228ENST00000459788 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 VPS53Q5VIR6 699 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 MAF1Q9H063 256 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 PFASO15067 1338 aa11.83□□□□□ -0.52
HDLBP-228ENST00000459788 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
HDLBP-228ENST00000459788 CNGA1P29973 690 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 FXR1P51114 621 aaKnown RBP eCLIP11.82□□□□□ -0.526e-6■■■□□ 17.2
HDLBP-228ENST00000459788 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
HDLBP-228ENST00000459788 AKNAD1Q5T1N1 836 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 C1orf53Q5VUE5 145 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-228ENST00000459788 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 DIAPH3Q9NSV4 1193 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
HDLBP-228ENST00000459788 TMEM232C9JQI7 657 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 KBTBD13C9JR72 458 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 AKR1A1P14550 325 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-228ENST00000459788 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-228ENST00000459788 LRRC47Q8N1G4 583 aaKnown RBP11.81□□□□□ -0.52
HDLBP-228ENST00000459788 GDF15Q99988 308 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 CTNNA3Q9UI47 895 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
HDLBP-228ENST00000459788 RAD50Q92878 1312 aa11.81□□□□□ -0.52
HDLBP-228ENST00000459788 ZNF213O14771 459 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 RARBP10826 455 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 SNX17Q15036 470 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 ANKRD35Q8N283 1001 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 ESR2Q92731 530 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
HDLBP-228ENST00000459788 ABHD16BQ9H3Z7 469 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
HDLBP-228ENST00000459788 RIPK3Q9Y572 518 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 LCTP09848 1927 aa11.8□□□□□ -0.52
HDLBP-228ENST00000459788 LTBP2Q14767 1821 aa11.79□□□□□ -0.52
HDLBP-228ENST00000459788 PGK2P07205 417 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms