RNA–Protein interactions for RNA: ENST00000458458.5

BBX-221, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-221ENST00000458458 LRRC7Q96NW7 1537 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 PRAMEF13Q5VWM6 474 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 SLC43A3Q8NBI5 491 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
BBX-221ENST00000458458 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 ZNRF3Q9ULT6 936 aa6.31□□□□□ -1.4
BBX-221ENST00000458458 ARHGEF12Q9NZN5 1544 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 UPK3BL1B0FP48 263 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 UPK3BL2E5RIL1 263 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 SLITRK5O94991 958 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 MED14OSP0DP75 135 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
BBX-221ENST00000458458 MCM4P33991 863 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 DBX2Q6ZNG2 339 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 GK5Q6ZS86 529 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 SPACA3Q8IXA5 215 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
BBX-221ENST00000458458 GMIPQ9P107 970 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 PTPRGP23470 1445 aa6.3□□□□□ -1.4
BBX-221ENST00000458458 CDK12Q9NYV4 1490 aaPredicted RBP6.29□□□□□ -1.4
BBX-221ENST00000458458 CAMSAP1Q5T5Y3 1602 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 TCAF2A6NFQ2 919 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 EOMESO95936 686 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 IMPDH2P12268 514 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
BBX-221ENST00000458458 ZC3H6P61129 1189 aaKnown RBP6.29□□□□□ -1.4
BBX-221ENST00000458458 LRRFIP1Q32MZ4 808 aaKnown RBP6.29□□□□□ -1.4
BBX-221ENST00000458458 C8orf37Q96NL8 207 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 GMLQ99445 158 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 CAPN10Q9HC96 672 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
BBX-221ENST00000458458 PITPNM2Q9BZ72 1349 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 NUAK1O60285 661 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 FOXD2O60548 495 aaPredicted RBP6.28□□□□□ -1.4
BBX-221ENST00000458458 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
BBX-221ENST00000458458 MLECQ14165 292 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 FAM13CQ8NE31 585 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 RIN3Q8TB24 985 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 PPP1R13LQ8WUF5 828 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
BBX-221ENST00000458458 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 PARD6AQ9NPB6 346 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 PPT2Q9UMR5 302 aa6.28□□□□□ -1.4
BBX-221ENST00000458458 SMG5Q9UPR3 1016 aaKnown RBP6.28□□□□□ -1.4
BBX-221ENST00000458458 ETV2O00321 342 aaPredicted RBP6.27□□□□□ -1.41
BBX-221ENST00000458458 NASPP49321 788 aaPredicted RBP6.27□□□□□ -1.41
BBX-221ENST00000458458 LINC00310P59036 64 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 INTS3Q68E01 1043 aaKnown RBP6.27□□□□□ -1.41
BBX-221ENST00000458458 LETMD1Q6P1Q0 360 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 DNAJB8Q8NHS0 232 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 CYB5D2Q8WUJ1 264 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 ATG4CQ96DT6 458 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 EPB41L4BQ9H329 900 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 DCP1AQ9NPI6 582 aaPredicted RBP6.27□□□□□ -1.41
BBX-221ENST00000458458 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 NHSL1Q5SYE7 1610 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
BBX-221ENST00000458458 A0A0G2JLL6 359 aaPredicted RBP6.26□□□□□ -1.41
BBX-221ENST00000458458 IGF2BP3O00425 579 aaKnown RBP eCLIP6.26□□□□□ -1.41
BBX-221ENST00000458458 GLDCP23378 1020 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 GIPRP48546 466 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 NKPD1Q17RQ9 610 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 NAALADL2Q58DX5 795 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 VPS37DQ86XT2 251 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 TAB3Q8N5C8 712 aaPredicted RBP6.26□□□□□ -1.41
BBX-221ENST00000458458 FERD3LQ96RJ6 166 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 MIPEPQ99797 713 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 KLHL3Q9UH77 587 aa6.26□□□□□ -1.41
BBX-221ENST00000458458 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 UACAQ9BZF9 1416 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 ERICH3Q5RHP9 1530 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 RNF17Q9BXT8 1623 aaKnown RBP6.25□□□□□ -1.41
BBX-221ENST00000458458 TNFRSF10CO14798 259 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 RGS13O14921 159 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
BBX-221ENST00000458458 GDNFP39905 211 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 KRTAP10-2P60368 255 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 ARSHQ5FYA8 562 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 C22orf34Q6ZV56 151 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 XAGE3Q8WTP9 111 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 SHDQ96IW2 340 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 CCDC74BQ96LY2 380 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 SRRTQ9BXP5 876 aaKnown RBP6.25□□□□□ -1.41
BBX-221ENST00000458458 IRF2BPLQ9H1B7 796 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 CARS2Q9HA77 564 aaKnown RBP6.25□□□□□ -1.41
BBX-221ENST00000458458 STRIP2Q9ULQ0 834 aa6.25□□□□□ -1.41
BBX-221ENST00000458458 RAPGEF3O95398 923 aa6.24□□□□□ -1.41
BBX-221ENST00000458458 FGRP09769 529 aa6.24□□□□□ -1.41
BBX-221ENST00000458458 CCNFP41002 786 aa6.24□□□□□ -1.41
BBX-221ENST00000458458 ARID5AQ03989 594 aa6.24□□□□□ -1.41
BBX-221ENST00000458458 ZNF746Q6NUN9 644 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms