RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 SIGLEC1Q9BZZ2 1709 aa5.88□□□□□ -1.47
SPARCL1-204ENST00000458304 MYO5BQ9ULV0 1848 aa5.88□□□□□ -1.47
SPARCL1-204ENST00000458304 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 A6NHS1 94 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 GSG1L2A8MUP6 293 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 NID1P14543 1247 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 CHRNA4P43681 627 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 ARSDP51689 593 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 MTMR1Q13613 665 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 IL31Q6EBC2 164 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 PRPF40BQ6NWY9 871 aaKnown RBP5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 OR6P1Q8NGX9 317 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 SNRNP27Q8WVK2 155 aaKnown RBP5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 NKD1Q969G9 470 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 HOOK2Q96ED9 719 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 MTMR8Q96EF0 704 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 RHOVQ96L33 236 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 TRIM56Q9BRZ2 755 aaKnown RBP5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 C11orf16Q9NQ32 467 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 ATG3Q9NT62 314 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 ZNF180Q9UJW8 692 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 SLC6A14Q9UN76 642 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 TRAK1Q9UPV9 953 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 ADGRF5Q8IZF2 1346 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 DIP2AQ14689 1571 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 C3P01024 1663 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 QRICH2Q9H0J4 1663 aa5.87□□□□□ -1.47
SPARCL1-204ENST00000458304 A2ML1A8K2U0 1454 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 MYBBP1AQ9BQG0 1328 aaKnown RBP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 DYTNA2CJ06 578 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 RASSF10A6NK89 507 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 C1QTNF9BB2RNN3 333 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 PRRT4C9JH25 899 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 RFPL3O75679 317 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 GJB6O95452 261 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 EPB42P16452 691 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 NFKB1P19838 968 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 NEK3P51956 506 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 GEMIN4P57678 1058 aaKnown RBP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ITKQ08881 620 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 PABPC4Q13310 644 aaKnown RBP eCLIP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ILDR2Q71H61 639 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ZBTB46Q86UZ6 589 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 CD163Q86VB7 1156 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 MORC1Q86VD1 984 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ANKLE2Q86XL3 938 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 SLITRK4Q8IW52 837 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 SNX29Q8TEQ0 813 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 SLC26A8Q96RN1 970 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 SELENOOQ9BVL4 669 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 UBE2OQ9C0C9 1292 aaKnown RBP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 SLC5A4Q9NY91 659 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 FAM13BQ9NYF5 915 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 ZFATQ9P243 1243 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 POLG2Q9UHN1 485 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 PUF60Q9UHX1 559 aaKnown RBP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 FBXO2Q9UK22 296 aaPredicted RBP5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 FRMD4BQ9Y2L6 1034 aa5.86□□□□□ -1.47
SPARCL1-204ENST00000458304 UBR1Q8IWV7 1749 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 RIMS1Q86UR5 1692 aaKnown RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 TMEM2Q9UHN6 1383 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 VSTM5A8MXK1 200 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PRPF3O43395 683 aaKnown RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 GADD45BO75293 160 aaPredicted RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 RFPL1O75677 317 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 EYA4O95677 639 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SPATA31C1P0DKV0 1188 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SRGNP10124 158 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 GARTP22102 1010 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 CRKP46108 304 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SETDB1Q15047 1291 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PPP2R5EQ16537 467 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SLC4A8Q2Y0W8 1093 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 CCDC184Q52MB2 194 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SNAP47Q5SQN1 464 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 CC2D1AQ6P1N0 951 aaPredicted RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 ZNF354CQ86Y25 554 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 NGDNQ8NEJ9 315 aaKnown RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PJA1Q8NG27 643 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 CFAP53Q96M91 514 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SCLT1Q96NL6 688 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 FERD3LQ96RJ6 166 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 HERPUD2Q9BSE4 406 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 SARGQ9BW04 601 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PRKRIP1Q9H875 184 aaPredicted RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 NPHS2Q9NP85 383 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 DNAJB12Q9NXW2 375 aaKnown RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 OBP2AQ9NY56 170 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 FOXD3Q9UJU5 478 aaPredicted RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 NAGPAQ9UK23 515 aa5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 NOL7Q9UMY1 257 aaKnown RBP5.85□□□□□ -1.47
SPARCL1-204ENST00000458304 ALKQ9UM73 1620 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms