RNA–Protein interactions for RNA: ENST00000456946.6

TRIM17-205, Transcript of tripartite motif containing 17, humanhuman

TSL 1 (best) BASIC

Gene TRIM17, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-205ENST00000456946 KIF23Q02241 960 aaPredicted RBP18.57■□□□□ 0.56
TRIM17-205ENST00000456946 ZNF543Q08ER8 600 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
TRIM17-205ENST00000456946 SLC16A2P36021 539 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 VEGFBP49765 207 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 CMTR1Q8N1G2 835 aaKnown RBP18.57■□□□□ 0.56
TRIM17-205ENST00000456946 FBXO28Q9NVF7 368 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 AGTPBP1Q9UPW5 1226 aa18.57■□□□□ 0.56
TRIM17-205ENST00000456946 BTBD19C9JJ37 291 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 KLRF2D3W0D1 207 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 DTNBO60941 627 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 KIF5BP33176 963 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 SCRN1Q12765 414 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 NOGQ13253 232 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
TRIM17-205ENST00000456946 GPAT2Q6NUI2 795 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 CCDC82Q8N4S0 544 aa18.56■□□□□ 0.56
TRIM17-205ENST00000456946 PALM3A6NDB9 673 aaPredicted RBP18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L15C9J2P7 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L13C9JLJ4 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L11C9JVI0 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L18D6R9N7 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L22D6RA61 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L17D6RBQ6 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L19D6RCP7 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L20D6RJB6 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 PFKFB2O60825 505 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 PRPF40AO75400 957 aaKnown RBP18.55■□□□□ 0.56
TRIM17-205ENST00000456946 FLOT1O75955 427 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 RCAN1P53805 252 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 USP17L24Q0WX57 530 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
TRIM17-205ENST00000456946 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 PTPN18Q99952 460 aa18.55■□□□□ 0.56
TRIM17-205ENST00000456946 FAM217BQ9NTX9 383 aaPredicted RBP18.55■□□□□ 0.56
TRIM17-205ENST00000456946 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
TRIM17-205ENST00000456946 STAT2P52630 851 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 CATSPERGQ6ZRH7 1159 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 KIFC2Q96AC6 838 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 RBM28Q9NW13 759 aaKnown RBP18.54■□□□□ 0.56
TRIM17-205ENST00000456946 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
TRIM17-205ENST00000456946 NID2Q14112 1375 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 PDHXO00330 501 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 IGF2BP3O00425 579 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRIM17-205ENST00000456946 IRX3P78415 501 aaPredicted RBP18.54■□□□□ 0.56
TRIM17-205ENST00000456946 SREBF2Q12772 1141 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 TMTC3Q6ZXV5 915 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 NBPF11Q86T75 865 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 PIBF1Q8WXW3 757 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 GTF3C6Q969F1 213 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 FEM1BQ9UK73 627 aa18.54■□□□□ 0.56
TRIM17-205ENST00000456946 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
TRIM17-205ENST00000456946 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 CPLX1O14810 134 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 PDCP20941 246 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRIM17-205ENST00000456946 ANKRD23Q86SG2 305 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 SRBD1Q8N5C6 995 aaKnown RBP18.53■□□□□ 0.56
TRIM17-205ENST00000456946 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 ATP6V1DQ9Y5K8 247 aa18.53■□□□□ 0.56
TRIM17-205ENST00000456946 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 F13A1P00488 732 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 HOXA7P31268 230 aaPredicted RBP18.52■□□□□ 0.56
TRIM17-205ENST00000456946 SNAP25P60880 206 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 SLC35G1Q2M3R5 365 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 SYDE2Q5VT97 1194 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 CHURC1Q8WUH1 139 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.56
TRIM17-205ENST00000456946 ASCC2Q9H1I8 757 aaPredicted RBP18.52■□□□□ 0.56
TRIM17-205ENST00000456946 CYP2C8P10632 490 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 OSBPP22059 807 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 GNAQP50148 359 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 INHBEP58166 350 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 PPP2R5BQ15173 497 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 FAM160B2Q86V87 743 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 IFNL1Q8IU54 200 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 PHKBQ93100 1093 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 ATG4CQ96DT6 458 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 P2RX7Q99572 595 aaKnown RBP18.52■□□□□ 0.55
TRIM17-205ENST00000456946 PRR12Q9ULL5 1215 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 MTMR6Q9Y217 621 aa18.52■□□□□ 0.55
TRIM17-205ENST00000456946 RLFQ13129 1914 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 THSD7BQ9C0I4 1608 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 hCG_1642624A0A1W2PR95 340 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 CYTH3O43739 400 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 DSG3P32926 999 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 COG2Q14746 738 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
TRIM17-205ENST00000456946 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 HOMER1Q86YM7 354 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms