RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 TBC1D16Q8TBP0 767 aa8.35□□□□□ -1.07
COMMD3-204ENST00000456711 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-204ENST00000456711 UTP14AQ9BVJ6 771 aaKnown RBP8.35□□□□□ -1.07
COMMD3-204ENST00000456711 PAK6Q9NQU5 681 aaPredicted RBP8.35□□□□□ -1.07
COMMD3-204ENST00000456711 DNAJB12Q9NXW2 375 aaKnown RBP8.35□□□□□ -1.07
COMMD3-204ENST00000456711 MUC6Q6W4X9 2439 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 ADGRA2Q96PE1 1338 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-204ENST00000456711 SASH1O94885 1247 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 HMOX1P09601 288 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 GTF2A2P52657 109 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 PLAURQ03405 335 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 GRIK5Q16478 980 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 TMEM31Q5JXX7 168 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 TTLL7Q6ZT98 887 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 DEFB129Q9H1M3 183 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 ZCCHC17Q9NP64 241 aaKnown RBP8.34□□□□□ -1.07
COMMD3-204ENST00000456711 THEGQ9P2T0 379 aa8.34□□□□□ -1.07
COMMD3-204ENST00000456711 OTOFQ9HC10 1997 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 SFI1A8K8P3 1242 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-204ENST00000456711 HCLS1P14317 486 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-204ENST00000456711 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
COMMD3-204ENST00000456711 PRKCZQ05513 592 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 TYRO3Q06418 890 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 C17orf99Q6UX52 265 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 DTWD1Q8N5C7 304 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 RHPN1Q8TCX5 695 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 ZNF232Q9UNY5 417 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 PCDHGA11Q9Y5H2 935 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 GPC6Q9Y625 555 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-204ENST00000456711 NCOR1O75376 2440 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 CEMIPQ8WUJ3 1361 aa8.33□□□□□ -1.08
COMMD3-204ENST00000456711 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
COMMD3-204ENST00000456711 ADCY3O60266 1144 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 DEAF1O75398 565 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-204ENST00000456711 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 PLPP7Q8NBV4 271 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 KRTAP4-5Q9BYR2 181 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 C11orf49Q9H6J7 331 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 PPP2R3BQ9Y5P8 575 aa8.32□□□□□ -1.08
COMMD3-204ENST00000456711 MMP14P50281 582 aa8.31□□□□□ -1.08
COMMD3-204ENST00000456711 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
COMMD3-204ENST00000456711 CELF1Q92879 486 aaKnown RBP8.31□□□□□ -1.08
COMMD3-204ENST00000456711 EPHX3Q9H6B9 360 aa8.31□□□□□ -1.08
COMMD3-204ENST00000456711 SNRKQ9NRH2 765 aa8.31□□□□□ -1.08
COMMD3-204ENST00000456711 CPA4Q9UI42 421 aa8.31□□□□□ -1.08
COMMD3-204ENST00000456711 MGAMO43451 1857 aa8.31□□□□□ -1.08
COMMD3-204ENST00000456711 COL4A1P02462 1669 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 BTBD19C9JJ37 291 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 UFL1O94874 794 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 SPINK2P20155 84 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 EPHA4P54764 986 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
COMMD3-204ENST00000456711 SLC9A9Q8IVB4 645 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
COMMD3-204ENST00000456711 ZBED3Q96IU2 234 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-204ENST00000456711 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-204ENST00000456711 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-204ENST00000456711 AKTIPQ9H8T0 292 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 GABRQQ9UN88 632 aa8.3□□□□□ -1.08
COMMD3-204ENST00000456711 MYO3BQ8WXR4 1341 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 CETPP11597 493 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 FCGRTP55899 365 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 DACT2Q5SW24 774 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 NBPF12Q5TAG4 269 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-204ENST00000456711 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 KRTAP17-1Q9BYP8 105 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.08
COMMD3-204ENST00000456711 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 ADGRE2Q9UHX3 823 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 PFASO15067 1338 aa8.29□□□□□ -1.08
COMMD3-204ENST00000456711 TCF20Q9UGU0 1960 aaKnown RBP8.28□□□□□ -1.08
COMMD3-204ENST00000456711 COL3A1P02461 1466 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-204ENST00000456711 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
COMMD3-204ENST00000456711 NHLH1Q02575 133 aa8.28□□□□□ -1.08
COMMD3-204ENST00000456711 OGFOD2Q6N063 350 aa8.28□□□□□ -1.08
COMMD3-204ENST00000456711 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-204ENST00000456711 C11orf16Q9NQ32 467 aa8.28□□□□□ -1.08
COMMD3-204ENST00000456711 RRP7AQ9Y3A4 280 aaKnown RBP8.28□□□□□ -1.08
COMMD3-204ENST00000456711 ZNF804BA4D1E1 1349 aa8.28□□□□□ -1.08
COMMD3-204ENST00000456711 MYL6BP14649 208 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 FLT3LGP49771 235 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 IRF5Q13568 498 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 VGLL4Q14135 290 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 SHHQ15465 462 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
COMMD3-204ENST00000456711 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms