RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 AHCTF1Q8WYP5 2266 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 PYGMP11217 842 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CCT6AP40227 531 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SLC4A3P48751 1232 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 HHATQ5VTY9 493 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ICE2Q659A1 982 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ABCC5O15440 1437 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 MYOM2P54296 1465 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ZNF233A6NK53 670 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ASIC1P78348 528 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TFAP4Q01664 338 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CEBPZQ03701 1054 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CYTH1Q15438 398 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CCDC93Q567U6 631 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 RNF216Q9NWF9 866 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SCN3AQ9NY46 2000 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SLFN12Q8IYM2 578 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 NLRP2Q9NX02 1062 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 EDC4Q6P2E9 1401 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TRPM1Q7Z4N2 1603 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 EXOC5O00471 708 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 XRCC5P13010 732 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 NSFP46459 744 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 MRPS9P82933 396 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 GRIN1Q05586 938 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ADALQ6DHV7 355 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 MAP7D3Q8IWC1 876 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 OSCARQ8IYS5 282 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 RPGRQ92834 1020 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 SAAL1Q96ER3 474 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ATP7BP35670 1465 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 PRG4Q92954 1404 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 ABCC12Q96J65 1359 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 BIN1O00499 593 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 INPP1P49441 399 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 GSDMBQ8TAX9 411 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 TUBA8Q9NY65 449 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 RAD21O60216 631 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 LAMB3Q13751 1172 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 CAPRIN1Q14444 709 aaKnown RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 OR8K1Q8NGG5 319 aa5.71□□□□□ -1.5
CSMD3-204ENST00000455883 FRMD8Q9BZ67 464 aaPredicted RBP5.71□□□□□ -1.5
CSMD3-204ENST00000455883 BASP1P80723 227 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 OR9Q1Q8NGQ5 310 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ALKBH8Q96BT7 664 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 JPH2Q9BR39 696 aaPredicted RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 CARD6Q9BX69 1037 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 HSPA2P54652 639 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 KIAA0825Q8IV33 1275 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 CCDC13Q8IYE1 715 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 CCDC63Q8NA47 563 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 LINS1Q8NG48 757 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 TBC1D22AQ8WUA7 517 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ARHGEF2Q92974 986 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 TRIM62Q9BVG3 475 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 TRPV6Q9H1D0 765 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ANO9A1A5B4 782 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 HSPA1LP34931 641 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ZNF75DP51815 510 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PARVBQ9HBI1 364 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ANKRD26Q9UPS8 1709 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 AREL1O15033 823 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 STX2P32856 288 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 POTEAQ6S8J7 498 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 TRPC6Q9Y210 931 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 USP16Q9Y5T5 823 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 RRS1Q15050 365 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 KRT71Q3SY84 523 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PCGF5Q86SE9 256 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PSPC1Q8WXF1 523 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 RIOK3O14730 519 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 GGPS1O95749 300 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PDE1AP54750 535 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 TEX11Q8IYF3 940 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PANX2Q96RD6 677 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 M0R3G1 203 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 MAP3K13O43283 966 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 SLC20A2Q08357 652 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PAK1Q13153 545 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 AMFRQ9UKV5 643 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 SETBP1Q9Y6X0 1596 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 CTNNA1P35221 906 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 NEK2P51955 445 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ARHGDIAP52565 204 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 BLVRAP53004 296 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 MED21Q13503 144 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 KAZNQ674X7 775 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 SULT6B1Q6IMI4 303 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PEX26Q7Z412 305 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PATL1Q86TB9 770 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 UBLCP1Q8WVY7 318 aaPredicted RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 DHX38Q92620 1227 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 NRDE2Q9H7Z3 1164 aa5.7□□□□□ -1.5
CSMD3-204ENST00000455883 ZNF638Q14966 1978 aaKnown RBP5.7□□□□□ -1.5
CSMD3-204ENST00000455883 PLA2R1Q13018 1463 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms