RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 PLA2G6O60733 806 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 SNAP25P60880 206 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 CUL4AQ13619 759 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 PRR12Q9ULL5 1215 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 CCDC196A0A1B0GTZ2 297 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 FLOT1O75955 427 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 TM4SF4P48230 202 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 SLC4A3P48751 1232 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 GNAQP50148 359 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 STAT2P52630 851 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 NOGQ13253 232 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 COG2Q14746 738 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 PHKBQ93100 1093 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 ASCC2Q9H1I8 757 aaPredicted RBP12.49□□□□□ -0.41
SYPL1-202ENST00000455385 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
SYPL1-202ENST00000455385 PDHXO00330 501 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 JAK2O60674 1132 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 IFNAR1P17181 557 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 DSG3P32926 999 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 SYDE2Q5VT97 1194 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
SYPL1-202ENST00000455385 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 SLF1Q9BQI6 1058 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 PCNTO95613 3336 aa12.48□□□□□ -0.41
SYPL1-202ENST00000455385 PARP14Q460N5 1801 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 CPLX1O14810 134 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 PEX10O60683 326 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 CYP2C8P10632 490 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 INHBEP58166 350 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 IKQ13123 557 aaPredicted RBP12.47□□□□□ -0.41
SYPL1-202ENST00000455385 FAM160B2Q86V87 743 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
SYPL1-202ENST00000455385 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 MTMR8Q96EF0 704 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 V9GY48 417 aaPredicted RBP12.47□□□□□ -0.41
SYPL1-202ENST00000455385 CNTNAP5Q8WYK1 1306 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
SYPL1-202ENST00000455385 FDPSP14324 419 aaKnown RBP12.47□□□□□ -0.41
SYPL1-202ENST00000455385 PIGSQ96S52 555 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
SYPL1-202ENST00000455385 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
SYPL1-202ENST00000455385 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
SYPL1-202ENST00000455385 PKN1Q16512 942 aa12.46□□□□□ -0.41
SYPL1-202ENST00000455385 SMARCC2Q8TAQ2 1214 aa12.46□□□□□ -0.41
SYPL1-202ENST00000455385 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
SYPL1-202ENST00000455385 SLC45A1Q9Y2W3 748 aa12.46□□□□□ -0.41
SYPL1-202ENST00000455385 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
SYPL1-202ENST00000455385 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 VWA5AO00534 786 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 OSBPP22059 807 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 HERVK_113P62684 666 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 IRX3P78415 501 aaPredicted RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 SREBF2Q12772 1141 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.425e-15■■■■■ 42.5
SYPL1-202ENST00000455385 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 REPS2Q8NFH8 660 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 DDX11Q96FC9 970 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 RANBP17Q9H2T7 1088 aaKnown RBP12.46□□□□□ -0.42
SYPL1-202ENST00000455385 CEP350Q5VT06 3117 aa12.46□□□□□ -0.42
SYPL1-202ENST00000455385 MAP2K2P36507 400 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 ZNF536O15090 1300 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
SYPL1-202ENST00000455385 SSRP1Q08945 709 aaKnown RBP12.45□□□□□ -0.42
SYPL1-202ENST00000455385 BECN1Q14457 450 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 CDC37Q16543 378 aaPredicted RBP12.45□□□□□ -0.42
SYPL1-202ENST00000455385 QRICH1Q2TAL8 776 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
SYPL1-202ENST00000455385 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 DNAJC5GQ8N7S2 189 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 AIFM3Q96NN9 605 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
SYPL1-202ENST00000455385 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms