RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 A0A087WZG4 1122 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 H7C1W4 665 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 TSPAN6O43657 245 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 GREM1O60565 184 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 GFRA3O60609 400 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 RPS6KA4O75676 772 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 MCM4P33991 863 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 GPC1P35052 558 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 ARSDP51689 593 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 RELBQ01201 579 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 HLFQ16534 295 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 LONRF3Q496Y0 759 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 SEZ6Q53EL9 994 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZFYVE27Q5T4F4 411 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 BICDL1Q6ZP65 573 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZNF295-AS1Q8N0V1 137 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 CMTR1Q8N1G2 835 aaKnown RBP6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 CCDC191Q8NCU4 936 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 KAZALD1Q96I82 304 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 APBA2Q99767 749 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 DCTPP1Q9H773 170 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 BSDC1Q9NW68 430 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 CWC25Q9NXE8 425 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 BCS1LQ9Y276 419 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 TLR6Q9Y2C9 796 aa6.28□□□□□ -1.4
HMGB1P4-201ENST00000455362 PNMA6EA0A0J9YXQ4 647 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 TNFRSF10AO00220 468 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 NRG2O14511 850 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PLSCR1O15162 318 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 HMMRO75330 724 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 WDHD1O75717 1129 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 CAMTA2O94983 1202 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZIC2O95409 532 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 APBA3O96018 575 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 MYCLP1P12525 358 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 EPB42P16452 691 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 GARTP22102 1010 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PMLP29590 882 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 SOX5P35711 763 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 TXLNAP40222 546 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 LIG3P49916 1009 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 IDH3AP50213 366 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 CASP7P55210 303 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 NFKB2Q00653 900 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 MAP3K10Q02779 954 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 NUCB1Q02818 461 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 MTX1Q13505 466 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 NFE2Q16621 373 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 FOXD4L6Q3SYB3 417 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 FOXD4L3Q6VB84 417 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PPP1R42Q7Z4L9 355 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 SKAP1Q86WV1 359 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 SLITRK4Q8IW52 837 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZNF34Q8IZ26 560 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 KDF1Q8NAX2 398 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 SSH3Q8TE77 659 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PMEPA1Q969W9 287 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 GCC1Q96CN9 775 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 MFSD3Q96ES6 412 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 IRX2Q9BZI1 471 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZNF395Q9H8N7 513 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 TMEM63CQ9P1W3 806 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PNMA2Q9UL42 364 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 USP20Q9Y2K6 914 aa6.27□□□□□ -1.41
HMGB1P4-201ENST00000455362 EREGO14944 169 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 FBXO24O75426 580 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 MYL1P05976 194 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 HMGB2P26583 209 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 CRKP46108 304 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 GIPRP48546 466 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 LMNB2Q03252 620 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 SSRP1Q08945 709 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 FOXC1Q12948 553 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZRSR2Q15696 482 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 TXNRD1Q16881 649 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 EPHA10Q5JZY3 1008 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 CLEC4GQ6UXB4 293 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 DTHD1Q6ZMT9 781 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 SMIM5Q71RC9 77 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 UBE3BQ7Z3V4 1068 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 C11orf96Q7Z7L8 435 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 NLRP10Q86W26 655 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 ITPKCQ96DU7 683 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 SUCLG2Q96I99 432 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 SUSD3Q96L08 255 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms