RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 USP28Q96RU2 1077 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 SCAND2PQ9GZW5 306 aaPredicted RBP19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 PHIPQ8WWQ0 1821 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 USP17L10C9JJH3 530 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 NLRP5P59047 1200 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 ATL3Q6DD88 541 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 CCDC148Q8NFR7 591 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 ZNF396Q96N95 335 aaPredicted RBP19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 PICK1Q9NRD5 415 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 CFAP45Q9UL16 551 aa19.25■□□□□ 0.67
PDXDC1-204ENST00000455313 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
PDXDC1-204ENST00000455313 CSPP1Q1MSJ5 1256 aa19.24■□□□□ 0.67
PDXDC1-204ENST00000455313 FAM83BQ5T0W9 1011 aa19.24■□□□□ 0.67
PDXDC1-204ENST00000455313 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
PDXDC1-204ENST00000455313 BRMS1Q9HCU9 246 aa19.24■□□□□ 0.67
PDXDC1-204ENST00000455313 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 POTEJP0CG39 1038 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 PTPRAP18433 802 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 CEBPZQ03701 1054 aaKnown RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 LEO1Q8WVC0 666 aaPredicted RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 KIAA1683Q9H0B3 1180 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 ELP1O95163 1332 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 PNMA6FA0A0J9YX94 578 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 hCG_1984214I3L0E3 225 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 ZBTB5O15062 677 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 CALML3P27482 149 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 NAPAP54920 295 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 NOL9Q5SY16 702 aaKnown RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 BTNL9Q6UXG8 535 aa19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 ZNF713Q8N859 430 aaPredicted RBP19.23■□□□□ 0.67
PDXDC1-204ENST00000455313 PPP1R12BO60237 982 aaPredicted RBP19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 PPP1R11O60927 126 aaPredicted RBP19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 GADD45BO75293 160 aaPredicted RBP19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 STAT2P52630 851 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 TNFRSF25Q93038 417 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 ADAMTS3O15072 1205 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 MTMR2Q13614 643 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 SYDE2Q5VT97 1194 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 CCDC12Q8WUD4 166 aaPredicted RBP19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 PCDHA4Q9UN74 947 aa19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 DDX49Q9Y6V7 483 aaKnown RBP19.22■□□□□ 0.67
PDXDC1-204ENST00000455313 CDC37Q16543 378 aaPredicted RBP19.21■□□□□ 0.67
PDXDC1-204ENST00000455313 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.21■□□□□ 0.67
PDXDC1-204ENST00000455313 ZMYND12Q9H0C1 365 aa19.21■□□□□ 0.67
PDXDC1-204ENST00000455313 AS3MTQ9HBK9 375 aa19.21■□□□□ 0.67
PDXDC1-204ENST00000455313 POLR3EQ9NVU0 708 aa19.21■□□□□ 0.67
PDXDC1-204ENST00000455313 NF2P35240 595 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 SPP2Q13103 211 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 DGKZQ13574 1117 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 VGLL4Q14135 290 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 SKOR2Q2VWA4 1001 aaPredicted RBP19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 EARS2Q5JPH6 523 aaKnown RBP19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 BLIDQ8IZY5 108 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 DAGLBQ8NCG7 672 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 ZNF280CQ8ND82 737 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 GPT2Q8TD30 523 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 LPAR1Q92633 364 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 COA7Q96BR5 231 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 RTEL1Q9NZ71 1219 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 CLIC4Q9Y696 253 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 ZHX2Q9Y6X8 837 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 FAM205CA6NFA0 338 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 GALNT17Q6IS24 598 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 PRR12Q9ULL5 1215 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 CLEC11AQ9Y240 323 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 SNCAIPQ9Y6H5 919 aa19.2■□□□□ 0.66
PDXDC1-204ENST00000455313 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 KLHL40Q2TBA0 621 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 NOM1Q5C9Z4 860 aaKnown RBP19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 RCOR1Q9UKL0 485 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 ESYT2A0FGR8 921 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 TRIM75PA6NK02 468 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 M0R2N6 131 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 TOB1P50616 345 aaPredicted RBP19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 BACE1P56817 501 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 UBE2HP62256 183 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 RILPL1Q5EBL4 403 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 ANO1Q5XXA6 986 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 RRAGCQ9HB90 399 aa19.19■□□□□ 0.66
PDXDC1-204ENST00000455313 SMCO2A6NFE2 343 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 PLA2G6O60733 806 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 IREB2P48200 963 aaKnown RBP19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 USP14P54578 494 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 SNAP25P60880 206 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 MAP1SQ66K74 1059 aaPredicted RBP19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 LINC00301Q8NCQ3 95 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 RASGRP4Q8TDF6 673 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 EMILIN3Q9NT22 766 aa19.18■□□□□ 0.66
PDXDC1-204ENST00000455313 FBXO28Q9NVF7 368 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms