RNA–Protein interactions for RNA: ENST00000455253.6

AF127936.2-201, humanhuman

TSL 5 BASIC

Gene AF127936.2, Length 1,724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF127936.2-201ENST00000455253 SIPA1L1O43166 1804 aa9.43□□□□□ -0.9
AF127936.2-201ENST00000455253 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
AF127936.2-201ENST00000455253 TBC1D12O60347 775 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SCG2P13521 617 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 ICA1Q05084 483 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SAFBQ15424 915 aaKnown RBP eCLIP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 PFKFB3Q16875 520 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 NBPF12Q5TAG4 269 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 TTBK2Q6IQ55 1244 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 KCTD1Q719H9 257 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SPATA32Q96LK8 384 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 USP28Q96RU2 1077 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 LZTS2Q9BRK4 669 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 XBP1P17861 261 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SLC16A2P36021 539 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 NR5A1Q13285 461 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 CCDC96Q2M329 555 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SLFN13Q68D06 897 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 HOMER1Q86YM7 354 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 TMEM87AQ8NBN3 555 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 LEO1Q8WVC0 666 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 PIGSQ96S52 555 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 PHF20Q9BVI0 1012 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 CLIC4Q9Y696 253 aa9.42□□□□□ -0.9
AF127936.2-201ENST00000455253 A0A1W2PRG0 241 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 F5H6K3 240 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 U2AF2P26368 475 aaKnown RBP eCLIP9.41□□□□□ -0.91e-7■□□□□ 10
AF127936.2-201ENST00000455253 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 CAP2P40123 477 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 ECE1P42892 770 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 NLRP5P59047 1200 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 MAP3K10Q02779 954 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 KLRC3Q07444 240 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 ZNF543Q08ER8 600 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 KLHL40Q2TBA0 621 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 DLK2Q6UY11 383 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 BRAPQ7Z569 592 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 CCDC84Q86UT8 332 aaPredicted RBP9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 ACER1Q8TDN7 264 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 ZBTB21Q9ULJ3 1066 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
AF127936.2-201ENST00000455253 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 ADAMTS3O15072 1205 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 ATP2B1P20020 1258 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 SLC1A4P43007 532 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 UBE2HP62256 183 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 CAVIN1Q6NZI2 390 aaKnown RBP9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 HEATR3Q7Z4Q2 680 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 NOSTRINQ8IVI9 506 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 RRP36Q96EU6 259 aaKnown RBP9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 RCOR1Q9UKL0 485 aa9.4□□□□□ -0.9
AF127936.2-201ENST00000455253 MYH8P13535 1937 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 GOLGA6L4A6NEF3 574 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 KIF3CO14782 793 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 NDUFB10O96000 172 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 SMARCA1P28370 1054 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 KRT2P35908 639 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 ZYXQ15942 572 aaKnown RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 ATL3Q6DD88 541 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 ADGRF4Q8IZF3 695 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 PGBD1Q96JS3 809 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 JMJD4Q9H9V9 463 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 ADARB2Q9NS39 739 aaKnown RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 RTEL1Q9NZ71 1219 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 SEC63Q9UGP8 760 aaKnown RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 SBF1O95248 1867 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 STXBP3O00186 592 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 GRIN3BO60391 1043 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 MBD3O95983 291 aa9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
AF127936.2-201ENST00000455253 PRKG1Q13976 671 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms