RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 MAPK4P31152 587 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 PKN2Q16513 984 aaKnown RBP11.05□□□□□ -0.64
ATXN3-205ENST00000454964 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 Q6ZUG5 572 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 SPICE1Q8N0Z3 855 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 FANCBQ8NB91 859 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 SHCBP1Q8NEM2 672 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-205ENST00000454964 MROH8Q9H579 483 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 SLC5A4Q9NY91 659 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 MORF4L1Q9UBU8 362 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 TACC3Q9Y6A5 838 aa11.05□□□□□ -0.64
ATXN3-205ENST00000454964 CDKL5O76039 1030 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 NEK4P51957 841 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 TROAPQ12815 778 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 CRHR2Q13324 411 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 GRM4Q14833 912 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 FAM83BQ5T0W9 1011 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 TREML2Q5T2D2 321 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 C17orf99Q6UX52 265 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
ATXN3-205ENST00000454964 IVNS1ABPQ9Y6Y0 642 aa11.04□□□□□ -0.64
ATXN3-205ENST00000454964 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 GPR25O00155 361 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 VWA5AO00534 786 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 FCGRTP55899 365 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 ANTXR2P58335 489 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 APOA5Q6Q788 366 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 CHST3Q7LGC8 479 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 COA7Q96BR5 231 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 TBC1D32Q96NH3 1257 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 TEX13BQ9BXU2 312 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
ATXN3-205ENST00000454964 SH2B1Q9NRF2 756 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 SEC63Q9UGP8 760 aaKnown RBP11.03□□□□□ -0.64
ATXN3-205ENST00000454964 ZNFX1Q9P2E3 1918 aaKnown RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 B4DLN1 442 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 CPLX1O14810 134 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 SEC24BO95487 1268 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 BCRP11274 1271 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 CAPN2P17655 700 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 STAT3P40763 770 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 METAP2P50579 478 aaKnown RBP eCLIP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 MRPL12P52815 198 aaKnown RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 ERVK-24P63145 666 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 SHROOM1Q2M3G4 852 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 SYDE2Q5VT97 1194 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 CHST13Q8NET6 341 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 NUP133Q8WUM0 1156 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 BRF1Q92994 677 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 RRP36Q96EU6 259 aaKnown RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 ZIC5Q96T25 663 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
ATXN3-205ENST00000454964 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 PARP14Q460N5 1801 aa11.02□□□□□ -0.65
ATXN3-205ENST00000454964 KLF18A0A0U1RQI7 1052 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 TBC1D8O95759 1140 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
ATXN3-205ENST00000454964 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
ATXN3-205ENST00000454964 CYP2C8P10632 490 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 RTN1Q16799 776 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 MCTP2Q6DN12 878 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 RIOX2Q8IUF8 465 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 CLEC10AQ8IUN9 316 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 CCDC12Q8WUD4 166 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-205ENST00000454964 SOCS4Q8WXH5 440 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 WASF1Q92558 559 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 SLKQ9H2G2 1235 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-205ENST00000454964 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
ATXN3-205ENST00000454964 MGAMO43451 1857 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms