RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 FERMT3Q86UX7 667 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 C7orf61Q8IZ16 206 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 DNAJB8Q8NHS0 232 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 BTN2A2Q8WVV5 523 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 TARS2Q9BW92 718 aaKnown RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 GP6Q9HCN6 339 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 ENAMQ9NRM1 1142 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 WHRNQ9P202 907 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 ERICH3Q5RHP9 1530 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 BLACEA4D250 179 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 F8W735 103 aaPredicted RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 SART1O43290 800 aaKnown RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 KCNH1O95259 989 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 NFICP08651 508 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 GLB1P16278 677 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 FAM50AQ14320 339 aaKnown RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 SF1Q15637 639 aaKnown RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 OSBP2Q969R2 916 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 NOL6Q9H6R4 1146 aaKnown RBP7.35□□□□□ -1.23
CDH19-202ENST00000454642 CAAP1Q9H8G2 361 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 HOMER2Q9NSB8 354 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 USP21Q9UK80 565 aa7.35□□□□□ -1.23
CDH19-202ENST00000454642 FHAD1B1AJZ9 1412 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 GNB5O14775 395 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
CDH19-202ENST00000454642 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
CDH19-202ENST00000454642 RFPL3O75679 317 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 SLITRK5O94991 958 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 FGFR1P11362 822 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 ITGA4P13612 1032 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
CDH19-202ENST00000454642 NFKB2Q00653 900 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 FNDC3BQ53EP0 1204 aaKnown RBP7.34□□□□□ -1.23
CDH19-202ENST00000454642 FBLIM1Q8WUP2 373 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 SEMA6CQ9H3T2 930 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 ACSS3Q9H6R3 686 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 NDOR1Q9UHB4 597 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 SFMBT1Q9UHJ3 866 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 PCDHB12Q9Y5F1 795 aa7.34□□□□□ -1.23
CDH19-202ENST00000454642 BIVM-ERCC5R4GMW8 1640 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
CDH19-202ENST00000454642 ZNF445P59923 1031 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 RNF4P78317 190 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
CDH19-202ENST00000454642 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 RNF180Q86T96 592 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 LRRTM3Q86VH5 581 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 DDX42Q86XP3 938 aaKnown RBP eCLIP7.33□□□□□ -1.24
CDH19-202ENST00000454642 MRGPRX3Q96LB0 322 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 AKTIPQ9H8T0 292 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 CGGBP1Q9UFW8 167 aaPredicted RBP7.33□□□□□ -1.24
CDH19-202ENST00000454642 EMC9Q9Y3B6 208 aa7.33□□□□□ -1.24
CDH19-202ENST00000454642 ABCC10Q5T3U5 1492 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
CDH19-202ENST00000454642 LRRN2O75325 713 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 SOX5P35711 763 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 GPAT2Q6NUI2 795 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 TRIM59Q8IWR1 403 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 VWCEQ96DN2 955 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 MRPL4Q9BYD3 311 aaKnown RBP7.32□□□□□ -1.24
CDH19-202ENST00000454642 ERCC6L2Q5T890 1561 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 MEIS1O00470 390 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 KCNJ6P48051 423 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 CDK5R2Q13319 367 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 SGO2Q562F6 1265 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 PRRT3Q5FWE3 981 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 ODR4Q5SWX8 454 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 POMZP3Q6PJE2 187 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 TMEM130Q8N3G9 435 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 FIBCD1Q8N539 461 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 JDP2Q8WYK2 163 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 ZDHHC15Q96MV8 337 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 SLC52A2Q9HAB3 445 aa7.32□□□□□ -1.24
CDH19-202ENST00000454642 WRNQ14191 1432 aaPredicted RBP eCLIP7.31□□□□□ -1.24
CDH19-202ENST00000454642 DIP2BQ9P265 1576 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 KCNQ2O43526 872 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 DLX3O60479 287 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 RXRBP28702 533 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 ETV3P41162 512 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 PRSS53Q2L4Q9 553 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 GTF2IRD2BQ6EKJ0 949 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 BRAPQ7Z569 592 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 GTF2IRD2Q86UP8 949 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 ARHGEF39Q8N4T4 335 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
CDH19-202ENST00000454642 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
CDH19-202ENST00000454642 PRDM14Q9GZV8 571 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 GFOD1Q9NXC2 390 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 CHPF2Q9P2E5 772 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 TPX2Q9ULW0 747 aaKnown RBP7.31□□□□□ -1.24
CDH19-202ENST00000454642 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
CDH19-202ENST00000454642 GPR55Q9Y2T6 319 aaPredicted RBP7.31□□□□□ -1.24
CDH19-202ENST00000454642 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms