RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FAM184BQ9ULE4 1060 aa28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 ZNFX1Q9P2E3 1918 aaKnown RBP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 A0A1W2PQ45 241 aaPredicted RBP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 A0A1W2PQY0 241 aa28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 RNF113AO15541 343 aaKnown RBP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 NDUFB10O96000 172 aa28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 ZFYP08048 801 aaPredicted RBP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 RAG1P15918 1043 aa28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 GNAT2P19087 354 aa28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 TSEN34Q9BSV6 310 aaKnown RBP28.35■■■□□ 2.13
LYSMD2-202ENST00000454181 MYH7P12883 1935 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 SMAD3P84022 425 aaKnown RBP28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 LRRFIP1Q32MZ4 808 aaKnown RBP28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 NUP133Q8WUM0 1156 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 OSBP2Q969R2 916 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 TMEM39AQ9NV64 488 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 ZHX1Q9UKY1 873 aaPredicted RBP28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 COL11A1P12107 1806 aaPredicted RBP28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 LTBP2Q14767 1821 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 PARP14Q460N5 1801 aa28.34■■■□□ 2.13
LYSMD2-202ENST00000454181 KIFC2Q96AC6 838 aa28.33■■■□□ 2.13
LYSMD2-202ENST00000454181 STARD7Q9NQZ5 370 aa28.33■■■□□ 2.13
LYSMD2-202ENST00000454181 SYNGAP1Q96PV0 1343 aa28.33■■■□□ 2.13
LYSMD2-202ENST00000454181 ROBO3Q96MS0 1386 aa28.33■■■□□ 2.13
LYSMD2-202ENST00000454181 SMCHD1A6NHR9 2005 aa28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 DCDC2CA8MYV0 355 aa28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 GPAA1O43292 621 aa28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 LENG1Q96BZ8 264 aaPredicted RBP28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 RNPC3Q96LT9 517 aaKnown RBP28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 CDX2Q99626 313 aaPredicted RBP28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 SEMA6BQ9H3T3 888 aa28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 RIPK3Q9Y572 518 aa28.32■■■□□ 2.12
LYSMD2-202ENST00000454181 KIAA0355O15063 1070 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 ACLYP53396 1101 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 C20orf194Q5TEA3 1177 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 ANKRD35Q8N283 1001 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 NACAP1Q9BZK3 213 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 SPC25Q9HBM1 224 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 FEM1BQ9UK73 627 aa28.31■■■□□ 2.12
LYSMD2-202ENST00000454181 MOXD2PA6NHM9 499 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 ATP2A1O14983 1001 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 ADAMTS4O75173 837 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 PRDM1O75626 825 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 MAMDC4Q6UXC1 1216 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 RAVER2Q9HCJ3 691 aaKnown RBP28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 FBXO40Q9UH90 709 aa28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 ISY1Q9ULR0 285 aaKnown RBP28.3■■■□□ 2.12
LYSMD2-202ENST00000454181 SYNRGQ9UMZ2 1314 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 SNAI1O95863 264 aaPredicted RBP28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 TTLL1O95922 423 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 FPGSQ05932 587 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 TSHZ3Q63HK5 1081 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 ZNF467Q7Z7K2 595 aaPredicted RBP28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 VTI1AQ96AJ9 217 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 CEP95Q96GE4 821 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 TOX2Q96NM4 488 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 DCTPP1Q9H773 170 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 SYNPO2Q9UMS6 1093 aa28.29■■■□□ 2.12
LYSMD2-202ENST00000454181 PLXNA1Q9UIW2 1896 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 DNAJC25-GNG10A0A024R161 153 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 DUSP11O75319 330 aaKnown RBP28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 SLC3A2P08195 630 aaKnown RBP28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 ITGB8P26012 769 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 KCNA10Q16322 511 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 ANKRD33Q7Z3H0 272 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 MKL1Q969V6 931 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 GLT1D1Q96MS3 346 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 SLC38A10Q9HBR0 1119 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 MTMR4Q9NYA4 1195 aa28.28■■■□□ 2.12
LYSMD2-202ENST00000454181 IGKV6D-41A0A0C4DH26 115 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 PATL2C9JE40 543 aaKnown RBP28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 TSPY3P0CV98 308 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 TSPY8P0CW00 308 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 PDE4BQ07343 736 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 ACVR2BQ13705 512 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 LRRC47Q8N1G4 583 aaKnown RBP28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 PCSK9Q8NBP7 692 aaKnown RBP28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 KLHDC9Q8NEP7 349 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 CHST13Q8NET6 341 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 ABHD16BQ9H3Z7 469 aa28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 EPB41L4AQ9HCS5 686 aaPredicted RBP28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.27■■■□□ 2.12
LYSMD2-202ENST00000454181 M0R2C6 588 aa28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 C6orf222P0C671 652 aaPredicted RBP28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 OAZ1P54368 228 aa28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 SLFN13Q68D06 897 aa28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 IFNL3Q8IZI9 196 aa28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 GMCL1P1Q8NEA9 526 aa28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 MAFAQ8NHW3 353 aaPredicted RBP28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 COL25A1Q9BXS0 654 aaPredicted RBP28.26■■■□□ 2.11
LYSMD2-202ENST00000454181 MROH7Q68CQ1 1323 aa28.25■■■□□ 2.11
LYSMD2-202ENST00000454181 FDX1P10109 184 aa28.25■■■□□ 2.11
LYSMD2-202ENST00000454181 BMP3P12645 472 aa28.25■■■□□ 2.11
LYSMD2-202ENST00000454181 FAAP100Q0VG06 881 aa28.25■■■□□ 2.11
LYSMD2-202ENST00000454181 ERC2O15083 957 aa28.24■■■□□ 2.11
LYSMD2-202ENST00000454181 EPHB4P54760 987 aa28.24■■■□□ 2.11
LYSMD2-202ENST00000454181 IKQ13123 557 aaPredicted RBP28.24■■■□□ 2.11
LYSMD2-202ENST00000454181 MYLIPQ8WY64 445 aa28.24■■■□□ 2.11
LYSMD2-202ENST00000454181 LAMA2P24043 3122 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms