RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 RBSNQ9H1K0 784 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 GOLGA6AQ9NYA3 693 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 FEZ2Q9UHY8 353 aaPredicted RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ANAPC4Q9UJX5 808 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 PTCH2Q9Y6C5 1203 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 NSD2O96028 1365 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 NINLQ9Y2I6 1382 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 UGGT1Q9NYU2 1555 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ARHGEF28Q8N1W1 1705 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 A6NHS1 94 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ALG1L2C9J202 215 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 BACH1O14867 736 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 AKAP10O43572 662 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 PPP1R12BO60237 982 aaPredicted RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 DIAPH1O60610 1272 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 COL6A1P12109 1028 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 PMLP29590 882 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 TCEA2Q15560 299 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 C1orf53Q5VUE5 145 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 CCDC174Q6PII3 467 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ELMSAN1Q6PJG2 1045 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 MSL3Q8N5Y2 521 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 UBR7Q8N806 425 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 NEUROD6Q96NK8 337 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 IPO9Q96P70 1041 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 CEP41Q9BYV8 373 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ASPSCR1Q9BZE9 553 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 RSPH9Q9H1X1 276 aaPredicted RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 FAM8A1Q9UBU6 413 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 SIGLEC1Q9BZZ2 1709 aa6.61□□□□□ -1.35
PCGEM1-201ENST00000454040 ANKRD26Q9UPS8 1709 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 SHPRHQ149N8 1683 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 NKTRP30414 1462 aaKnown RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 A0A087X0B3 334 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 HMX2A2RU54 273 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 SIM2Q14190 667 aaPredicted RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 CENPQQ7L2Z9 268 aaPredicted RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 CHPFQ8IZ52 775 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 AGGF1Q8N302 714 aaeCLIP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 THAP3Q8WTV1 239 aaPredicted RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 CPLX3Q8WVH0 158 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 TRIM56Q9BRZ2 755 aaKnown RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 C2orf49Q9BVC5 232 aaPredicted RBP6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 GGNBP2Q9H3C7 697 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 ZHX3Q9H4I2 956 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 ZIM2Q9NZV7 527 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 ZNF232Q9UNY5 417 aa6.6□□□□□ -1.35
PCGEM1-201ENST00000454040 NEXMIFQ5QGS0 1516 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 PLEKHH1Q9ULM0 1364 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 MINDY4BA8MYZ0 360 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 GIPC1O14908 333 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 KATNA1O75449 491 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 RASGRP1O95267 797 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 LDHCP07864 332 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 NFKB2Q00653 900 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 SEPT6Q14141 434 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 GRAMD1BQ3KR37 738 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 ERAP2Q6P179 960 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 CCDC81Q6ZN84 652 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 MAP4K3Q8IVH8 894 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 IFNL3Q8IZI9 196 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 SPICE1Q8N0Z3 855 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 CEP120Q8N960 986 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 MYRIPQ8NFW9 859 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 ZNF296Q8WUU4 475 aaPredicted RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 SNRNP27Q8WVK2 155 aaKnown RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 CCDC39Q9UFE4 941 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 PLAAQ9Y263 795 aa6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 CLTCQ00610 1675 aaKnown RBP6.59□□□□□ -1.35
PCGEM1-201ENST00000454040 REREQ9P2R6 1566 aa6.59□□□□□ -1.36
PCGEM1-201ENST00000454040 VIRMAQ69YN4 1812 aaKnown RBP6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 CGNL1Q0VF96 1302 aa6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 EVC2Q86UK5 1308 aa6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 BICDL2A1A5D9 508 aa6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 HOXA10P31260 410 aaPredicted RBP6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 EIF4A3P38919 411 aaKnown RBP6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 MMP14P50281 582 aa6.58□□□□□ -1.36
PCGEM1-201ENST00000454040 PLAURQ03405 335 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms