RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 ZNF213O14771 459 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 PLA2G6O60733 806 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 MCCP23508 829 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 CCND3P30281 292 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-207ENST00000453796 PRPF38BQ5VTL8 546 aaKnown RBP17.21■□□□□ 0.35
HSPG2-207ENST00000453796 OLFML2BQ68BL8 750 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 RCSD1Q6JBY9 416 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 RNF41Q9H4P4 317 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-207ENST00000453796 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
HSPG2-207ENST00000453796 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 FARP2O94887 1054 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-207ENST00000453796 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
HSPG2-207ENST00000453796 FCER1AP12319 257 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 COPB2P35606 906 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 SLC1A4P43007 532 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-207ENST00000453796 STAT2P52630 851 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.34
HSPG2-207ENST00000453796 DPP9Q86TI2 863 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 TEX13BQ9BXU2 312 aa17.2■□□□□ 0.34
HSPG2-207ENST00000453796 ZBED4O75132 1171 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 FDX1P10109 184 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 TOP1P11387 765 aaKnown RBP17.19■□□□□ 0.34
HSPG2-207ENST00000453796 NT5C2P49902 561 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 MFSD14CQ5VZR4 134 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 LHX8Q68G74 356 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 SNRNP48Q6IEG0 339 aaKnown RBP17.19■□□□□ 0.34
HSPG2-207ENST00000453796 CENPQQ7L2Z9 268 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-207ENST00000453796 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 ANKLE1Q8NAG6 615 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 CHURC1Q8WUH1 139 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
HSPG2-207ENST00000453796 CYBAP13498 195 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 CYP2C19P33261 490 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 OAZ1P54368 228 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
HSPG2-207ENST00000453796 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 TRPV1Q8NER1 839 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 DCAF4Q8WV16 495 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 ESR2Q92731 530 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 TTC14Q96N46 770 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 MMP19Q99542 508 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
HSPG2-207ENST00000453796 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 MCM3APO60318 1980 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 ZNF536O15090 1300 aa17.18■□□□□ 0.34
HSPG2-207ENST00000453796 SGSM2O43147 1006 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 PTH1RQ03431 593 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 ZNF792Q3KQV3 632 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 CPXCR1Q8N123 301 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 DIS3LQ8TF46 1054 aaKnown RBP17.17■□□□□ 0.34
HSPG2-207ENST00000453796 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 SLC5A4Q9NY91 659 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 DIS3Q9Y2L1 958 aaKnown RBP17.17■□□□□ 0.34
HSPG2-207ENST00000453796 LCTP09848 1927 aa17.17■□□□□ 0.34
HSPG2-207ENST00000453796 DNAJC25-GNG10A0A024R161 153 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 B4E1Z4 1266 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 KDM4AO75164 1064 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 PGK2P07205 417 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 KCTD2Q14681 263 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 SKAP1Q86WV1 359 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 PAWRQ96IZ0 340 aaKnown RBP17.16■□□□□ 0.34
HSPG2-207ENST00000453796 ZKSCAN3Q9BRR0 538 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
HSPG2-207ENST00000453796 PDHBP11177 359 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 MTMR7Q9Y216 660 aa17.15■□□□□ 0.34
HSPG2-207ENST00000453796 CTDP1Q9Y5B0 961 aaPredicted RBP17.15■□□□□ 0.34
HSPG2-207ENST00000453796 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
HSPG2-207ENST00000453796 CCDC96Q2M329 555 aa17.14■□□□□ 0.33
HSPG2-207ENST00000453796 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
HSPG2-207ENST00000453796 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
HSPG2-207ENST00000453796 HTATIP2Q9BUP3 242 aa17.14■□□□□ 0.33
HSPG2-207ENST00000453796 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
HSPG2-207ENST00000453796 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
HSPG2-207ENST00000453796 CYP21A2P08686 494 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 PRAMEF19Q5SWL8 479 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 NECAB2Q7Z6G3 386 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 IQCA1Q86XH1 822 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 FGD4Q96M96 766 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 TINF2Q9BSI4 451 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 KRT23Q9C075 422 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
HSPG2-207ENST00000453796 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
HSPG2-207ENST00000453796 FRMPD2Q68DX3 1309 aaPredicted RBP17.13■□□□□ 0.33
HSPG2-207ENST00000453796 MYH6P13533 1939 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms