RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 RASGRP2Q7LDG7 609 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ZNF713Q8N859 430 aaPredicted RBP14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 PIBF1Q8WXW3 757 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 C12orf42Q96LP6 360 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ZSCAN16Q9H4T2 348 aaPredicted RBP14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ELP3Q9H9T3 547 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 JMJD4Q9H9V9 463 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 EMILIN3Q9NT22 766 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ZDHHC9Q9Y397 364 aa14.47□□□□□ -0.09
HLA-DPA1-244ENST00000453337 hCG_1642624A0A1W2PR95 340 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 FMR1Q06787 632 aaKnown RBP eCLIP14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 PPIL2Q13356 520 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 KRT40Q6A162 431 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 CCDC12Q8WUD4 166 aaPredicted RBP14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 MTMR8Q96EF0 704 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 CLMNQ96JQ2 1002 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 AIFM3Q96NN9 605 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 TCHHQ07283 1943 aa14.46□□□□□ -0.09
HLA-DPA1-244ENST00000453337 ZBTB5O15062 677 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 F13A1P00488 732 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FDX1P10109 184 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CALML3P27482 149 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FOSBP53539 338 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HMGCS2P54868 508 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GUCY1B3Q02153 619 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FOXD4L5Q5VV16 416 aaPredicted RBP14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GALNT17Q6IS24 598 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HOMER1Q86YM7 354 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FOXD4L4Q8WXT5 416 aaPredicted RBP14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PIGSQ96S52 555 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PTPRFP10586 1907 aa14.45□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KIF3CO14782 793 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 VCAM1P19320 739 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 NLRP5P59047 1200 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CST9Q5W186 159 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HEATR3Q7Z4Q2 680 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 SMC1BQ8NDV3 1235 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CCDC148Q8NFR7 591 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 OPTNQ96CV9 577 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BRMS1Q9HCU9 246 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BARHL2Q9NY43 387 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 VPS54Q9P1Q0 977 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KCNH4Q9UQ05 1017 aa14.44□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L15C9J2P7 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L13C9JLJ4 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L11C9JVI0 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L18D6R9N7 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L22D6RA61 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L17D6RBQ6 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L19D6RCP7 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L20D6RJB6 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 IRF6O14896 467 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 MMP1P03956 469 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 USP17L24Q0WX57 530 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GNL2Q13823 731 aaKnown RBP14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 COG2Q14746 738 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CLEC17AQ6ZS10 378 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PROCA1Q8NCQ7 364 aaPredicted RBP14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KIFC2Q96AC6 838 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PHF20Q9BVI0 1012 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GJB4Q9NTQ9 266 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PNMA2Q9UL42 364 aa14.43□□□□□ -0.1
HLA-DPA1-244ENST00000453337 A0A0G2JLL6 359 aaPredicted RBP14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 STXBP3O00186 592 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FLOT1O75955 427 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 TOMM70O94826 608 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GNA11P29992 359 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 NAPAP54920 295 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 SNAPC2Q13487 334 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CDC37Q16543 378 aaPredicted RBP14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 QRICH1Q2TAL8 776 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CATSPERGQ6ZRH7 1159 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PRRT2Q7Z6L0 340 aaPredicted RBP14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FBXO11Q86XK2 927 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 AMNQ9BXJ7 453 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 C6orf50Q9HD87 102 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KCNJ14Q9UNX9 436 aa14.42□□□□□ -0.1
HLA-DPA1-244ENST00000453337 ESYT2A0FGR8 921 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 ZBED4O75132 1171 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms