RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TRPA1O75762 1119 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 RXRAP19793 462 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-205ENST00000452322 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-205ENST00000452322 TTBK2Q6IQ55 1244 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-205ENST00000452322 GPCPD1Q9NPB8 672 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
LINC00339-205ENST00000452322 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 ST18O60284 1047 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 FDX1P10109 184 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 GNAQP50148 359 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00339-205ENST00000452322 PPP2R5BQ15173 497 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 KIFC2Q96AC6 838 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
LINC00339-205ENST00000452322 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
LINC00339-205ENST00000452322 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
LINC00339-205ENST00000452322 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
LINC00339-205ENST00000452322 SLC16A2P36021 539 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 RTN1Q16799 776 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 FAM110CQ1W6H9 321 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 SYDE2Q5VT97 1194 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
LINC00339-205ENST00000452322 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 VWA5AO00534 786 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 TBC1D8O95759 1140 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 BCRP11274 1271 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 SMARCA1P28370 1054 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 NOM1Q5C9Z4 860 aaKnown RBP13.83□□□□□ -0.19
LINC00339-205ENST00000452322 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.19
LINC00339-205ENST00000452322 REPS2Q8NFH8 660 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.19
LINC00339-205ENST00000452322 SLC38A10Q9HBR0 1119 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 RBPJLQ9UBG7 517 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.19
LINC00339-205ENST00000452322 ZBED4O75132 1171 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 CNMDO75829 334 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 PLEKHA8P1O95397 391 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 OAZ1P54368 228 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
LINC00339-205ENST00000452322 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 R3HDMLQ9H3Y0 253 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-205ENST00000452322 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 CPA4Q9UI42 421 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 LIMCH1Q9UPQ0 1083 aa13.83□□□□□ -0.2
LINC00339-205ENST00000452322 COL11A1P12107 1806 aaPredicted RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 ATP2A1O14983 1001 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 CYTH3O43739 400 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 DHX16O60231 1041 aaKnown RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 PFKFB2O60825 505 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 CDC27P30260 824 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 MCM2P49736 904 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 ERVK-9P63128 1117 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 ERVK-24P63145 666 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 SLC35G1Q2M3R5 365 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 NOL8Q76FK4 1167 aaKnown RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 JMJD4Q9H9V9 463 aa13.82□□□□□ -0.2
LINC00339-205ENST00000452322 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
LINC00339-205ENST00000452322 GPR25O00155 361 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
LINC00339-205ENST00000452322 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
LINC00339-205ENST00000452322 STK3Q13188 491 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 ME3Q16798 604 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 ZSCAN31Q96LW9 406 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-205ENST00000452322 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 SLKQ9H2G2 1235 aaPredicted RBP13.81□□□□□ -0.2
LINC00339-205ENST00000452322 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
LINC00339-205ENST00000452322 ZNF536O15090 1300 aa13.8□□□□□ -0.2
LINC00339-205ENST00000452322 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
LINC00339-205ENST00000452322 LARGE1O95461 756 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms