RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
PKP4-206ENST00000452162 CALM1P0DP23 149 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 CALM2P0DP24 149 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 CALM3P0DP25 149 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 PFKFB1P16118 471 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 MARCKSP29966 332 aaPredicted RBP12.31□□□□□ -0.44
PKP4-206ENST00000452162 INPP5BP32019 993 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 IQCB1Q15051 598 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 SAFBQ15424 915 aaKnown RBP eCLIP12.31□□□□□ -0.44
PKP4-206ENST00000452162 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
PKP4-206ENST00000452162 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
PKP4-206ENST00000452162 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
PKP4-206ENST00000452162 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
PKP4-206ENST00000452162 FAM237AA0A1B0GTK4 181 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 FAM155AB1AL88 458 aaPredicted RBP12.3□□□□□ -0.44
PKP4-206ENST00000452162 PLCD1P51178 756 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 PKN1Q16512 942 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 JMYQ8N9B5 988 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 ZIC5Q96T25 663 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 HPSEQ9Y251 543 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 PHF20L1A8MW92 1017 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 PRPF3O43395 683 aaKnown RBP12.3□□□□□ -0.44
PKP4-206ENST00000452162 AOC2O75106 756 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 PLEKHA8P1O95397 391 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
PKP4-206ENST00000452162 PDE4BQ07343 736 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 VGLL4Q14135 290 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 DNAJC18Q9H819 358 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.3□□□□□ -0.44
PKP4-206ENST00000452162 ZNF112Q9UJU3 913 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 ATAD5Q96QE3 1844 aa12.3□□□□□ -0.44
PKP4-206ENST00000452162 TBC1D12O60347 775 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 NMT2O60551 498 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 ZNF202O95125 648 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 SLC10A3P09131 477 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 ECE1P42892 770 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 NT5C2P49902 561 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 MKRN3Q13064 507 aaKnown RBP12.29□□□□□ -0.44
PKP4-206ENST00000452162 FAM47AQ5JRC9 791 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 SHC4Q6S5L8 630 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 TMTC3Q6ZXV5 915 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 ELP3Q9H9T3 547 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 MYH8P13535 1937 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 CUTAO60888 179 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 RRP1BQ14684 758 aaKnown RBP12.29□□□□□ -0.44
PKP4-206ENST00000452162 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
PKP4-206ENST00000452162 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
PKP4-206ENST00000452162 PLA2G4DQ86XP0 818 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
PKP4-206ENST00000452162 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 ERCC4Q92889 916 aaPredicted RBP12.28□□□□□ -0.44
PKP4-206ENST00000452162 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 HERC5Q9UII4 1024 aaKnown RBP12.28□□□□□ -0.44
PKP4-206ENST00000452162 CSADQ9Y600 493 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 SNCAIPQ9Y6H5 919 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 A0A087WWV3 80 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 UNCXA6NJT0 531 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 GJA5P36382 358 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 ZNF75DP51815 510 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
PKP4-206ENST00000452162 NR5A1Q13285 461 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 RILPL1Q5EBL4 403 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
PKP4-206ENST00000452162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.44
PKP4-206ENST00000452162 TSPY2A6NKD2 308 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 OFD1O75665 1012 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.44
PKP4-206ENST00000452162 WNK4Q96J92 1243 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 CLIC6Q96NY7 704 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 VPS54Q9P1Q0 977 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.44
PKP4-206ENST00000452162 SERPINB13Q9UIV8 391 aa12.27□□□□□ -0.44
PKP4-206ENST00000452162 THSD7BQ9C0I4 1608 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 SYKP43405 635 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.45
PKP4-206ENST00000452162 SPRYD7Q5W111 196 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 SARM1Q6SZW1 724 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 CEP57L1Q8IYX8 460 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms