RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 MCCP23508 829 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 SLC1A4P43007 532 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 SNAP25P60880 206 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 KCTD2Q14681 263 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 ALX1Q15699 326 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 NECAB2Q7Z6G3 386 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 UBE2Q1Q7Z7E8 422 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
USP54-207ENST00000451492 GMCL1P1Q8NEA9 526 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 ZKSCAN3Q9BRR0 538 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 IL17RBQ9NRM6 502 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 ANAPC4Q9UJX5 808 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 LRRC37A2A6NM11 1700 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 ZMYM6O95789 1325 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 FRMPD2Q68DX3 1309 aaPredicted RBP11.44□□□□□ -0.58
USP54-207ENST00000451492 HIP1O00291 1037 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 STRNO43815 780 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 EVI5O60447 810 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 HOXC6P09630 235 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
USP54-207ENST00000451492 STAT2P52630 851 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 PRAMEF19Q5SWL8 479 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 CCDC174Q6PII3 467 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 C7orf61Q8IZ16 206 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 MKL1Q969V6 931 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 MAML3Q96JK9 1138 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 TEX13BQ9BXU2 312 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 IL25Q9H293 177 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 SLC5A4Q9NY91 659 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 ADAMTS5Q9UNA0 930 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 RIPK3Q9Y572 518 aa11.44□□□□□ -0.58
USP54-207ENST00000451492 ZNF213O14771 459 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 ORC4O43929 436 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 CYBAP13498 195 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 MFSD6Q6ZSS7 791 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 DDX20Q9UHI6 824 aaKnown RBP11.43□□□□□ -0.58
USP54-207ENST00000451492 OGDHLQ9ULD0 1010 aa11.43□□□□□ -0.58
USP54-207ENST00000451492 PFASO15067 1338 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 COPB2P35606 906 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 OLFML2BQ68BL8 750 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 LHX8Q68G74 356 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 ABRAQ8N0Z2 381 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 DDX11Q96FC9 970 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 GMCL1Q96IK5 515 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
USP54-207ENST00000451492 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
USP54-207ENST00000451492 B4E1Z4 1266 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 ALAS1P13196 640 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 SYN1P17600 705 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 SLC16A2P36021 539 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
USP54-207ENST00000451492 GJC2Q5T442 439 aaPredicted RBP11.41□□□□□ -0.58
USP54-207ENST00000451492 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 SKAP1Q86WV1 359 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 CHURC1Q8WUH1 139 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
USP54-207ENST00000451492 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
USP54-207ENST00000451492 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
USP54-207ENST00000451492 SYNPO2Q9UMS6 1093 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 NR2E3Q9Y5X4 410 aa11.41□□□□□ -0.58
USP54-207ENST00000451492 KDM4AO75164 1064 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 FGRP09769 529 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 IMMTQ16891 758 aaKnown RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 RCSD1Q6JBY9 416 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 TICAM2Q86XR7 235 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 DCAF4Q8WV16 495 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 ESR2Q92731 530 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 TINF2Q9BSI4 451 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 RNF146Q9NTX7 359 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
USP54-207ENST00000451492 PRR12Q9ULL5 1215 aa11.4□□□□□ -0.58
USP54-207ENST00000451492 KBTBD13C9JR72 458 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 SEPT4O43236 478 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 MSCO60682 206 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms