RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZBTB10Q96DT7 871 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CCDC42Q96M95 316 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CCDC85AQ96PX6 553 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 POLR3CQ9BUI4 534 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 TRAIPQ9BWF2 469 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MMADHCQ9H3L0 296 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SH2D4AQ9H788 454 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MRPL40Q9NQ50 206 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PPANQ9NQ55 473 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 DNAJC17Q9NVM6 304 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 CARD8Q9Y2G2 431 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SH3BP1Q9Y3L3 701 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 COMMD3-BMI1R4GMX3 469 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 DEPDC5O75140 1603 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CDK13Q14004 1512 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 I3L4J1 428 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 O00370 1275 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MAPK13O15264 365 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 FOXP2O15409 715 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CUTAO60888 179 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SDSP20132 328 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 USP5P45974 858 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 AP2B1P63010 937 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 OCA2Q04671 838 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MYO1EQ12965 1108 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 RASGRF1Q13972 1273 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 FAM133BQ5BKY9 247 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 IRGCQ6NXR0 463 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 C16orf87Q6PH81 154 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 LRRC31Q6UY01 552 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 HORMAD1Q86X24 394 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ERMNQ8TAM6 284 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZNF473Q8WTR7 871 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 RPGRQ92834 1020 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 ZWILCHQ9H900 591 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 BMP2KQ9NSY1 1161 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 CCDC87Q9NVE4 849 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GID8Q9NWU2 228 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PACSIN2Q9UNF0 486 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PTPRMP28827 1452 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 LTBP4Q8N2S1 1624 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SPATA31E1Q6ZUB1 1445 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZNF142P52746 1687 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PSMA7O14818 248 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SPTLC2O15270 562 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 AKR1B10O60218 316 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 FAM107AO95990 144 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 KRT7P08729 469 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 HSPA6P17066 643 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 AARSP49588 968 aaKnown RBP eCLIP2.42□□□□□ -2.02
USP53-202ENST00000450251 PDE6CP51160 858 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SEL1L2Q5TEA6 688 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NCAPH2Q6IBW4 605 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZNF280DQ6N043 979 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CENPUQ71F23 418 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CADPS2Q86UW7 1296 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 AFAP1L2Q8N4X5 818 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 LRRC8CQ8TDW0 803 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GRK7Q8WTQ7 553 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 COG1Q8WTW3 980 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CLMNQ96JQ2 1002 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZFRQ96KR1 1074 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 TANGO6Q9C0B7 1094 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GDPD2Q9HCC8 539 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ABCB6Q9NP58 842 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TMOD4Q9NZQ9 345 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GUCA1BQ9UMX6 200 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 STK38LQ9Y2H1 464 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SH3GLB1Q9Y371 365 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NOC2LQ9Y3T9 749 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 ADGRL2O95490 1459 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CPS1P31327 1500 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 C19orf67A6NJJ6 358 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 XPOTO43592 962 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SPAG7O75391 227 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 DEAF1O75398 565 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PDE5AO76074 875 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZWINTO95229 277 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 DDIT3P35638 169 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 VHLP40337 213 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MTIF2P46199 727 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SERPINB10P48595 397 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 OLR1P78380 273 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GSTA3Q16772 222 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PRR16Q569H4 304 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TEDDM1Q5T9Z0 273 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PCNX4Q63HM2 1172 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NXNQ6DKJ4 435 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 WDR93Q6P2C0 686 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 LARP1Q6PKG0 1096 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 FRA10AC1Q70Z53 315 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 UBE3BQ7Z3V4 1068 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 IFNL1Q8IU54 200 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZKSCAN4Q969J2 545 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 ATP6V1G3Q96LB4 118 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TSNARE1Q96NA8 513 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 RAB34Q9BZG1 259 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 XPO4Q9C0E2 1151 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 DCTPP1Q9H773 170 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NOD2Q9HC29 1040 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms