RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 GSDMAQ96QA5 445 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 GYPCP04921 128 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TECP42680 631 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TRIM14Q14142 442 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 SRPRBQ9Y5M8 271 aaKnown RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 MYO3AQ8NEV4 1616 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 PHKG2P15735 406 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 MYOM1P52179 1685 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 COG1Q8WTW3 980 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 N4BP2L2Q92802 583 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 PRCPP42785 496 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 NR1I3Q14994 352 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TCP11X2Q5H9J9 407 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 KCNB2Q92953 911 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
UBE3B-204ENST00000449510 TSPY3P0CV98 308 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 TSPY8P0CW00 308 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 GYG1P46976 350 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 DAAM2Q86T65 1068 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 LCORLQ8N3X6 602 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 FERMT2Q96AC1 680 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 MS4A14Q96JA4 679 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 CD163L1Q9NR16 1453 aa13.77□□□□□ -0.2
UBE3B-204ENST00000449510 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 EIF4A3P38919 411 aaKnown RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 USP14P54578 494 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 SAP30BPQ9UHR5 308 aaKnown RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 FMNL1O95466 1100 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-204ENST00000449510 IFNAR1P17181 557 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 ARHGAP25P42331 645 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 KLK7P49862 253 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 IRAK1P51617 712 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 PAK2Q13177 524 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 INTS13Q9NVM9 706 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 PTPRMP28827 1452 aa13.77□□□□□ -0.21
UBE3B-204ENST00000449510 CAMSAP1Q5T5Y3 1602 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 SOS2Q07890 1332 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 FGFR1OPO95684 399 aaKnown RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 BMP6P22004 513 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 DNM2P50570 870 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 PLS1Q14651 629 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 H7C1D1 291 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ADD2P35612 726 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 TNNC1P63316 161 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 AP1M1Q9BXS5 423 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 VIRMAQ69YN4 1812 aaKnown RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 BICDL2A1A5D9 508 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 NMT2O60551 498 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ABCB4P21439 1286 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 RSRC2Q7L4I2 434 aaKnown RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 VPS36Q86VN1 386 aa13.76□□□□□ -0.21
UBE3B-204ENST00000449510 ADD3Q9UEY8 706 aaKnown RBP13.76□□□□□ -0.21
UBE3B-204ENST00000449510 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 ERVK-24P63145 666 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 DYNLL1P63167 89 aaKnown RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 APBA1Q02410 837 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 SEPT7Q16181 437 aaKnown RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 ANKIB1Q9P2G1 1089 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 FAM184BQ9ULE4 1060 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 CD2APQ9Y5K6 639 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 CALRP27797 417 aaKnown RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 TEX11Q8IYF3 940 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 SLCO1A2P46721 670 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms