RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
SHMT2-203ENST00000449049 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
SHMT2-203ENST00000449049 DEXIO95424 95 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 ADGRF4Q8IZF3 695 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 CHURC1Q8WUH1 139 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-203ENST00000449049 MYH6P13533 1939 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-203ENST00000449049 GTF2A2P52657 109 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 PKN1Q16512 942 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
SHMT2-203ENST00000449049 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
SHMT2-203ENST00000449049 RLFQ13129 1914 aa16.28■□□□□ 0.2
SHMT2-203ENST00000449049 SLC10A3P09131 477 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 AKAP17AQ02040 695 aaKnown RBP16.27■□□□□ 0.2
SHMT2-203ENST00000449049 IKQ13123 557 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-203ENST00000449049 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 WASF1Q92558 559 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.2
SHMT2-203ENST00000449049 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 KIF3AQ9Y496 699 aa16.27■□□□□ 0.2
SHMT2-203ENST00000449049 USP17L15C9J2P7 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L11C9JVI0 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L18D6R9N7 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L22D6RA61 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L19D6RCP7 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L20D6RJB6 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 USP17L24Q0WX57 530 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 PFKFB3Q16875 520 aaPredicted RBP16.27■□□□□ 0.19
SHMT2-203ENST00000449049 GADL1Q6ZQY3 521 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 PIGSQ96S52 555 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.19
SHMT2-203ENST00000449049 CETPP11597 493 aa16.26■□□□□ 0.19
SHMT2-203ENST00000449049 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-203ENST00000449049 APLP1P51693 650 aa16.26■□□□□ 0.19
SHMT2-203ENST00000449049 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
SHMT2-203ENST00000449049 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
SHMT2-203ENST00000449049 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
SHMT2-203ENST00000449049 hCG_1642624A0A1W2PR95 340 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 FLOT1O75955 427 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 SCG2P13521 617 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
SHMT2-203ENST00000449049 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 RANBP17Q9H2T7 1088 aaKnown RBP16.25■□□□□ 0.19
SHMT2-203ENST00000449049 PPP1R9AQ9ULJ8 1098 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-203ENST00000449049 ZBTB5O15062 677 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 PDCP20941 246 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-203ENST00000449049 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 RGS22Q8NE09 1264 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 AIFM3Q96NN9 605 aa16.25■□□□□ 0.19
SHMT2-203ENST00000449049 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
SHMT2-203ENST00000449049 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 TESPA1A2RU30 521 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-203ENST00000449049 COG2Q14746 738 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 CCL15Q16663 113 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 ADAMTS5Q9UNA0 930 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 hCG_1984214I3L0E3 225 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 SYT1P21579 422 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 DSG3P32926 999 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.198e-7■■■■■ 32.8
SHMT2-203ENST00000449049 QRICH1Q2TAL8 776 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 LARP1BQ659C4 914 aaKnown RBP16.24■□□□□ 0.19
SHMT2-203ENST00000449049 ZNF713Q8N859 430 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-203ENST00000449049 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
SHMT2-203ENST00000449049 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-203ENST00000449049 FDX1P10109 184 aa16.23■□□□□ 0.19
SHMT2-203ENST00000449049 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
SHMT2-203ENST00000449049 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
SHMT2-203ENST00000449049 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-203ENST00000449049 MANSC4A6NHS7 340 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-203ENST00000449049 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
SHMT2-203ENST00000449049 DEKP35659 375 aaKnown RBP16.22■□□□□ 0.19
SHMT2-203ENST00000449049 ANKRD23Q86SG2 305 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-203ENST00000449049 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms