RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 CCL14Q16627 93 aa29.56■■■□□ 2.32
HTATSF1-203ENST00000448450 IMMTQ16891 758 aaKnown RBP29.56■■■□□ 2.32
HTATSF1-203ENST00000448450 WDR78Q5VTH9 848 aa29.56■■■□□ 2.32
HTATSF1-203ENST00000448450 RNF41Q9H4P4 317 aaPredicted RBP29.56■■■□□ 2.32
HTATSF1-203ENST00000448450 CUL9Q8IWT3 2517 aa29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 SGSM2O43147 1006 aa29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 COL6A1P12109 1028 aa29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 CCND3P30281 292 aaPredicted RBP29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 LRIT3Q3SXY7 679 aa29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 SLFN13Q68D06 897 aa29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 UBE2OQ9C0C9 1292 aaKnown RBP29.55■■■□□ 2.32
HTATSF1-203ENST00000448450 NEDD4P46934 1319 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 DLL1O00548 723 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 MAP2K5Q13163 448 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 PLS1Q14651 629 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 PPP4R3BQ5MIZ7 849 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 DEFB123Q8N688 67 aa29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 ISY1Q9ULR0 285 aaKnown RBP29.54■■■□□ 2.32
HTATSF1-203ENST00000448450 PCP11498 1178 aaKnown RBP29.53■■■□□ 2.32
HTATSF1-203ENST00000448450 LHX8Q68G74 356 aa29.53■■■□□ 2.32
HTATSF1-203ENST00000448450 GMCL1P1Q8NEA9 526 aa29.53■■■□□ 2.32
HTATSF1-203ENST00000448450 MTMR7Q9Y216 660 aa29.53■■■□□ 2.32
HTATSF1-203ENST00000448450 BMP2KLQ5H9B9 411 aa29.52■■■□□ 2.32
HTATSF1-203ENST00000448450 SPATC1LQ9H0A9 340 aa29.52■■■□□ 2.32
HTATSF1-203ENST00000448450 PPP1R9AQ9ULJ8 1098 aa29.52■■■□□ 2.32
HTATSF1-203ENST00000448450 SYNPO2Q9UMS6 1093 aa29.52■■■□□ 2.32
HTATSF1-203ENST00000448450 LAMA4Q16363 1823 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 PARP14Q460N5 1801 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 MFSD14CQ5VZR4 134 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 MB21D1Q8N884 522 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 ESR2Q92731 530 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 SLF1Q9BQI6 1058 aa29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 MOV10L1Q9BXT6 1211 aaKnown RBP29.51■■■□□ 2.31
HTATSF1-203ENST00000448450 LAMA2P24043 3122 aaKnown RBP29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 B4E1Z4 1266 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 BMP3P12645 472 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 MCCP23508 829 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 ZKSCAN3Q9BRR0 538 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 TCP11L1Q9NUJ3 509 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 PPP4R2Q9NY27 417 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 ADAMTS5Q9UNA0 930 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 IVNS1ABPQ9Y6Y0 642 aa29.5■■■□□ 2.31
HTATSF1-203ENST00000448450 VWA5AO00534 786 aa29.49■■■□□ 2.31
HTATSF1-203ENST00000448450 KDM4AO75164 1064 aa29.49■■■□□ 2.31
HTATSF1-203ENST00000448450 TMEM132BQ14DG7 1078 aa29.49■■■□□ 2.31
HTATSF1-203ENST00000448450 LRRC26Q2I0M4 334 aa29.49■■■□□ 2.31
HTATSF1-203ENST00000448450 COL11A1P12107 1806 aaPredicted RBP29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 SLC15A5A6NIM6 579 aa29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 Q7L0L9 218 aa29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 KIFC2Q96AC6 838 aa29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 TMEM47Q9BQJ4 181 aa29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 U3KPZ7 1027 aaPredicted RBP29.48■■■□□ 2.31
HTATSF1-203ENST00000448450 SLC1A4P43007 532 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 NOVP48745 357 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 KIAA1211Q6ZU35 1233 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 RASGRP2Q7LDG7 609 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 NCAPG2Q86XI2 1143 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 PRPF38AQ8NAV1 312 aaKnown RBP29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 ESYT1Q9BSJ8 1104 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 FEM1BQ9UK73 627 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 A0A0G2JMZ2 1700 aa29.47■■■□□ 2.31
HTATSF1-203ENST00000448450 TMEM232C9JQI7 657 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 MSCO60682 206 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 TOP1P11387 765 aaKnown RBP29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 ERCC3P19447 782 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 PTPREP23469 700 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 KCTD1Q719H9 257 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 GMCL1Q96IK5 515 aa29.46■■■□□ 2.31
HTATSF1-203ENST00000448450 IKQ13123 557 aaPredicted RBP29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 ERICH6BQ5W0A0 696 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 RCSD1Q6JBY9 416 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 MAP4K1Q92918 833 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 KRT23Q9C075 422 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 FLRT1Q9NZU1 646 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 ZSWIM5Q9P217 1185 aa29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 CTDP1Q9Y5B0 961 aaPredicted RBP29.45■■■□□ 2.31
HTATSF1-203ENST00000448450 CYP21A2P08686 494 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 HOXC6P09630 235 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 STAT3P40763 770 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 SLC4A3P48751 1232 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 MDM2Q00987 491 aaPredicted RBP29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 GRB14Q14449 540 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 SHCBP1Q8NEM2 672 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 REPS2Q8NFH8 660 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 TTC14Q96N46 770 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 CNNM2Q9H8M5 875 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 DDX20Q9UHI6 824 aaKnown RBP29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 STXBP5LQ9Y2K9 1186 aa29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 RBM8AQ9Y5S9 174 aaKnown RBP29.44■■■□□ 2.3
HTATSF1-203ENST00000448450 ZNF236Q9UL36 1845 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 ZBED4O75132 1171 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 CNGA1P29973 690 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 CCDC96Q2M329 555 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 IQCA1Q86XH1 822 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 CPXCR1Q8N123 301 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 MTMR10Q9NXD2 777 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 TAF6LQ9Y6J9 622 aa29.43■■■□□ 2.3
HTATSF1-203ENST00000448450 UNC80Q8N2C7 3258 aa29.42■■■□□ 2.3
HTATSF1-203ENST00000448450 CHURC1Q8WUH1 139 aa29.42■■■□□ 2.3
HTATSF1-203ENST00000448450 SENP6Q9GZR1 1112 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms