RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RAD50Q92878 1312 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 ZBED4O75132 1171 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
PRPF40A-203ENST00000448428 TOP1P11387 765 aaKnown RBP15.03■□□□□ -0
PRPF40A-203ENST00000448428 FCER1AP12319 257 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
PRPF40A-203ENST00000448428 PTH1RQ03431 593 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 KCTD1Q719H9 257 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 RASGRP2Q7LDG7 609 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 ABRAQ8N0Z2 381 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 CPXCR1Q8N123 301 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 ESR2Q92731 530 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 TTC14Q96N46 770 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
PRPF40A-203ENST00000448428 MTMR7Q9Y216 660 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 RIPK3Q9Y572 518 aa15.03■□□□□ -0
PRPF40A-203ENST00000448428 BRCA2P51587 3418 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 PLXNA1Q9UIW2 1896 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 B4E1Z4 1266 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 ATP2A1O14983 1001 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 SGSM2O43147 1006 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 PLA2G6O60733 806 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 KDM4AO75164 1064 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 IGHA2P01877 340 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 STAT2P52630 851 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 SNRNP48Q6IEG0 339 aaKnown RBP15.02■□□□□ -0
PRPF40A-203ENST00000448428 CHURC1Q8WUH1 139 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 ZKSCAN3Q9BRR0 538 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 TEX13BQ9BXU2 312 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 CRISPLD2Q9H0B8 497 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 SLC38A10Q9HBR0 1119 aa15.02■□□□□ -0
PRPF40A-203ENST00000448428 RAVER2Q9HCJ3 691 aaKnown RBP15.02■□□□□ -0
PRPF40A-203ENST00000448428 CTDP1Q9Y5B0 961 aaPredicted RBP15.02■□□□□ -0
PRPF40A-203ENST00000448428 CCND3P30281 292 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 MFSD14CQ5VZR4 134 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 UBE2Q1Q7Z7E8 422 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 DCAF4Q8WV16 495 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 MMP19Q99542 508 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 ZSWIM5Q9P217 1185 aa15.01□□□□□ -0.01
PRPF40A-203ENST00000448428 PGK2P07205 417 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 FDX1P10109 184 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 CAPN2P17655 700 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 CYP2C19P33261 490 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 COPB2P35606 906 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 NT5C2P49902 561 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 IKQ13123 557 aaPredicted RBP15□□□□□ -0.01
PRPF40A-203ENST00000448428 KCTD2Q14681 263 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 OLFML2BQ68BL8 750 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 KRT23Q9C075 422 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 SLC5A4Q9NY91 659 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 SMCHD1A6NHR9 2005 aa15□□□□□ -0.01
PRPF40A-203ENST00000448428 OAZ1P54368 228 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 SNAP25P60880 206 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 CCDC96Q2M329 555 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 ANKS1AQ92625 1134 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 MAML3Q96JK9 1138 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 ZSCAN10Q96SZ4 725 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 CNNM2Q9H8M5 875 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 GPCPD1Q9NPB8 672 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-203ENST00000448428 ZNF536O15090 1300 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 PDE4DIPQ5VU43 2346 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 FARP2O94887 1054 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 CYP21A2P08686 494 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 PDHBP11177 359 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 SLC16A2P36021 539 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 ZNF792Q3KQV3 632 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 LHX8Q68G74 356 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 BTNL9Q6UXG8 535 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 MAP4K1Q92918 833 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 AGBL1Q96MI9 1066 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 OGDHLQ9ULD0 1010 aa14.98□□□□□ -0.01
PRPF40A-203ENST00000448428 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 SNHG28P0DPA3 235 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 PRAMEF19Q5SWL8 479 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 CYB5R4Q7L1T6 521 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 ENAHQ8N8S7 591 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 CHST13Q8NET6 341 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 PAWRQ96IZ0 340 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 ESYT1Q9BSJ8 1104 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 DIS3Q9Y2L1 958 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 TAF6LQ9Y6J9 622 aa14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-203ENST00000448428 FRMPD3Q5JV73 1810 aa14.96□□□□□ -0.01
PRPF40A-203ENST00000448428 DNAJC25-GNG10A0A024R161 153 aa14.96□□□□□ -0.01
PRPF40A-203ENST00000448428 NEFLP07196 543 aa14.96□□□□□ -0.01
PRPF40A-203ENST00000448428 CYBAP13498 195 aa14.96□□□□□ -0.01
PRPF40A-203ENST00000448428 CNGA1P29973 690 aa14.96□□□□□ -0.01
PRPF40A-203ENST00000448428 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms