RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 CHMP4CQ96CF2 233 aa15.3■□□□□ 0.04
ERGIC3-209ENST00000447986 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
ERGIC3-209ENST00000447986 CWC22Q9HCG8 908 aaKnown RBP15.3■□□□□ 0.04
ERGIC3-209ENST00000447986 VWA5AO00534 786 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 SNHG28P0DPA3 235 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 LIFRP42702 1097 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 PSMC4P43686 418 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 PLS1Q14651 629 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
ERGIC3-209ENST00000447986 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 MAPK4P31152 587 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 ANAPC15P60006 121 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 ZNF543Q08ER8 600 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 NBR1Q14596 966 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 SYNE3Q6ZMZ3 975 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 COA7Q96BR5 231 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 LY9Q9HBG7 655 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 GPCPD1Q9NPB8 672 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 COPB2P35606 906 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 HS6ST3Q8IZP7 471 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 SPATC1LQ9H0A9 340 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
ERGIC3-209ENST00000447986 CNMDO75829 334 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 DDAH1O94760 285 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 CALM1P0DP23 149 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 CALM2P0DP24 149 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 CALM3P0DP25 149 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 OAZ1P54368 228 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 PRMT2P55345 433 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 Q3C1V9 767 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 BTNL9Q6UXG8 535 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 RASGRP2Q7LDG7 609 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 OTOP1Q7RTM1 612 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC12A7Q9Y666 1083 aa15.27■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC25A27O95847 323 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 RPS6KB1P23443 525 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 KIF5BP33176 963 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 GSE1Q14687 1217 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 TMEM132BQ14DG7 1078 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 SYDE2Q5VT97 1194 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 WDR78Q5VTH9 848 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 RUFY3Q7L099 469 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 ZNF654Q8IZM8 581 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 SHCBP1Q8NEM2 672 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 TEX13BQ9BXU2 312 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 LRRC2Q9BYS8 371 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 ARHGAP39Q9C0H5 1083 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 IVNS1ABPQ9Y6Y0 642 aa15.26■□□□□ 0.03
ERGIC3-209ENST00000447986 ATP2A1O14983 1001 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 DHX16O60231 1041 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 PEX10O60683 326 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SEC24BO95487 1268 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 GOLGA8HP0CJ92 632 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SLC16A2P36021 539 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 STAT3P40763 770 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 TROAPQ12815 778 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 TTBK2Q6IQ55 1244 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 CPXCR1Q8N123 301 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 TCEANC2Q96MN5 208 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 MOV10L1Q9BXT6 1211 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 MROH8Q9H579 483 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 ZSWIM6Q9HCJ5 1215 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 PNMA2Q9UL42 364 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 A0A0G2JMZ2 1700 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 GRM4Q14833 912 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SNRNP48Q6IEG0 339 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 RIOX2Q8IUF8 465 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 PORCNQ9H237 461 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 SRRDQ9UH36 339 aa15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 ZNF214Q9UL59 606 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-209ENST00000447986 KLRF2D3W0D1 207 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 CPA1P15085 419 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 ERCC3P19447 782 aa15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 FBXO46Q6PJ61 603 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-209ENST00000447986 Q6ZUG5 572 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms