RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 PLEKHH3Q7Z736 793 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 NCAPG2Q86XI2 1143 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 PRPF38AQ8NAV1 312 aaKnown RBP13.98□□□□□ -0.17
RFC4-208ENST00000447345 SENP2Q9HC62 589 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 MCM3APO60318 1980 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
RFC4-208ENST00000447345 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 PRC1O43663 620 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 ZBED4O75132 1171 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 ELNP15502 786 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 ERCC3P19447 782 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 CYP2B6P20813 491 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
RFC4-208ENST00000447345 SEC23AQ15436 765 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 SNRNP48Q6IEG0 339 aaKnown RBP13.97□□□□□ -0.17
RFC4-208ENST00000447345 FAM160B2Q86V87 743 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 REPS2Q8NFH8 660 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 CPVLQ9H3G5 476 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
RFC4-208ENST00000447345 ZNF214Q9UL59 606 aaPredicted RBP13.97□□□□□ -0.17
RFC4-208ENST00000447345 PRR12Q9ULL5 1215 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
RFC4-208ENST00000447345 LCTP09848 1927 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
RFC4-208ENST00000447345 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 WTAPQ15007 396 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 CCDC174Q6PII3 467 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 CHURC1Q8WUH1 139 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 SOCS4Q8WXH5 440 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
RFC4-208ENST00000447345 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
RFC4-208ENST00000447345 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
RFC4-208ENST00000447345 ADCY3O60266 1144 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
RFC4-208ENST00000447345 GRK4P32298 578 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 MCM5P33992 734 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 STAT3P40763 770 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 SOX10P56693 466 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 ADCK5Q3MIX3 580 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 SYDE2Q5VT97 1194 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 RIOX2Q8IUF8 465 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 ANKS1AQ92625 1134 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 TCEANC2Q96MN5 208 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 TEX13BQ9BXU2 312 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
RFC4-208ENST00000447345 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
RFC4-208ENST00000447345 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
RFC4-208ENST00000447345 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 PTPREP23469 700 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 HSPA4P34932 840 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 IRF5Q13568 498 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 MORN1Q5T089 497 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 SHCBP1Q8NEM2 672 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 UBA5Q9GZZ9 404 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 MROH8Q9H579 483 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
RFC4-208ENST00000447345 SLC15A5A6NIM6 579 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
RFC4-208ENST00000447345 DHX16O60231 1041 aaKnown RBP13.93□□□□□ -0.18
RFC4-208ENST00000447345 SLC25A27O95847 323 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 INHAP05111 366 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 CPA1P15085 419 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 ADORA2AP29274 412 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 RGS2P41220 211 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 MAP2K5Q13163 448 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 GRB14Q14449 540 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 CCL14Q16627 93 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
RFC4-208ENST00000447345 NFXL1Q6ZNB6 911 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 NBPF11Q86T75 865 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 IGDCC4Q8TDY8 1250 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 NUP133Q8WUM0 1156 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 TRIB2Q92519 343 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 ARMC5Q96C12 935 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 AGBL1Q96MI9 1066 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 JAKMIP1Q96N16 626 aaKnown RBP13.93□□□□□ -0.18
RFC4-208ENST00000447345 MMP19Q99542 508 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 APBA2Q99767 749 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 MYL10Q9BUA6 226 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 SNX14Q9Y5W7 946 aa13.93□□□□□ -0.18
RFC4-208ENST00000447345 ZNF536O15090 1300 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 PLA2G6O60733 806 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 FCER1AP12319 257 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 ALAS1P13196 640 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 OAZ1P54368 228 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 TRIM32Q13049 653 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms