RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PCMTD2Q9NV79 361 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 SNTG2Q9NY99 539 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 LMCD1Q9NZU5 365 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 PDPK1O15530 556 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 DPH6Q7L8W6 267 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 EEPD1Q7L9B9 569 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 FIBCD1Q8N539 461 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 USHBP1Q8N6Y0 703 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 MRGPRX3Q96LB0 322 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 DEPDC7Q96QD5 511 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 APBA2Q99767 749 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 CGGBP1Q9UFW8 167 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 DUSP13Q9UII6 198 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 PCDHA11Q9Y5I1 949 aa6.66□□□□□ -1.34
HMGB1P48-201ENST00000446155 H0Y8X5 98 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 PPM1BO75688 479 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF205O95201 554 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 GSNP06396 782 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 FUT4P22083 530 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 BMP8BP34820 402 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 TEKQ02763 1124 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 ANGEL2Q5VTE6 544 aaKnown RBP6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 CRTC3Q6UUV7 619 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 LINC00116Q8NCU8 138 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 ADCY4Q8NFM4 1077 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 DIS3Q9Y2L1 958 aaKnown RBP6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 EMC9Q9Y3B6 208 aa6.65□□□□□ -1.34
HMGB1P48-201ENST00000446155 WNT11O96014 354 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 GRB10Q13322 594 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 IKZF1Q13422 519 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 NOL9Q5SY16 702 aaKnown RBP6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 RNF111Q6ZNA4 994 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZNF227Q86WZ6 799 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 CREG2Q8IUH2 290 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 FLCNQ8NFG4 579 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 PIF1Q9H611 641 aa6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 NOL6Q9H6R4 1146 aaKnown RBP6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 CARS2Q9HA77 564 aaKnown RBP6.64□□□□□ -1.35
HMGB1P48-201ENST00000446155 TMEM82A0PJX8 343 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 ITGAVP06756 1048 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 EGR3Q06889 387 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 RTP2Q5QGT7 225 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 BVESQ8NE79 360 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 SGSM3Q96HU1 749 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 LGR4Q9BXB1 951 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 FOXP3Q9BZS1 431 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZMYM5Q9UJ78 669 aa6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 ANGEL1Q9UNK9 670 aaKnown RBP6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 SF3B6Q9Y3B4 125 aaKnown RBP6.63□□□□□ -1.35
HMGB1P48-201ENST00000446155 MEIS1O00470 390 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 SYPP08247 313 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 VAV1P15498 845 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 PCBP3P57721 371 aaKnown RBP6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZP2Q05996 745 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 BMS1Q14692 1282 aaKnown RBP6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 SPATC1Q76KD6 591 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ADAT2Q7Z6V5 191 aaKnown RBP6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 JMYQ8N9B5 988 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZDHHC15Q96MV8 337 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 SRPK1Q96SB4 655 aaKnown RBP6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 G6PC3Q9BUM1 346 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 SLC12A9Q9BXP2 914 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZSWIM4Q9H7M6 989 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ZFP64Q9NPA5 681 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 ADAMTS6Q9UKP5 1117 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 TCFL5Q9UL49 500 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
HMGB1P48-201ENST00000446155 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 A0A1W2PQU0 124 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 TBX1O43435 398 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 ADCY3O60266 1144 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 LTKP29376 864 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 CYP4F3Q08477 520 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 PPP2R5DQ14738 602 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 NFE2L2Q16236 605 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 SV2CQ496J9 727 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 SLC23A3Q6PIS1 610 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 SUGT1Q9Y2Z0 365 aa6.61□□□□□ -1.35
HMGB1P48-201ENST00000446155 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 DIAPH1O60610 1272 aaKnown RBP6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 POU4F1Q01851 419 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 GTF2IRD2BQ6EKJ0 949 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 POMZP3Q6PJE2 187 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 GTF2IRD2Q86UP8 949 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 LRRN4CLQ8ND94 238 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 ARHGEF4Q9NR80 690 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 EBF1Q9UH73 591 aa6.6□□□□□ -1.35
HMGB1P48-201ENST00000446155 DNAJC25-GNG10A0A024R161 153 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 IQCA1LA6NCM1 817 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms