RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 KIFC2Q96AC6 838 aa22.28■■□□□ 1.16
COMMD1-204ENST00000445644 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
COMMD1-204ENST00000445644 MAML3Q96JK9 1138 aa22.28■■□□□ 1.16
COMMD1-204ENST00000445644 HTATIP2Q9BUP3 242 aa22.28■■□□□ 1.16
COMMD1-204ENST00000445644 FEM1BQ9UK73 627 aa22.28■■□□□ 1.16
COMMD1-204ENST00000445644 PGK2P07205 417 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 DNAH12Q6ZR08 3092 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 NECAB2Q7Z6G3 386 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 MMP19Q99542 508 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 SLC38A10Q9HBR0 1119 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 STX8Q9UNK0 236 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 PFASO15067 1338 aa22.27■■□□□ 1.16
COMMD1-204ENST00000445644 LCTP09848 1927 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 ATP2A1O14983 1001 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 SNRNP48Q6IEG0 339 aaKnown RBP22.26■■□□□ 1.15
COMMD1-204ENST00000445644 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 TEX13BQ9BXU2 312 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 SMCHD1A6NHR9 2005 aa22.26■■□□□ 1.15
COMMD1-204ENST00000445644 TMEM232C9JQI7 657 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 MCCP23508 829 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 ZNF792Q3KQV3 632 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 RRP12Q5JTH9 1297 aaKnown RBP22.25■■□□□ 1.15
COMMD1-204ENST00000445644 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 RAVER2Q9HCJ3 691 aaKnown RBP22.25■■□□□ 1.15
COMMD1-204ENST00000445644 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 DDX20Q9UHI6 824 aaKnown RBP22.25■■□□□ 1.15
COMMD1-204ENST00000445644 NEDD4P46934 1319 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 MCM3APO60318 1980 aa22.25■■□□□ 1.15
COMMD1-204ENST00000445644 COL6A1P12109 1028 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 MFAP1P55081 439 aaKnown RBP22.24■■□□□ 1.15
COMMD1-204ENST00000445644 PRAMEF19Q5SWL8 479 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 KCTD1Q719H9 257 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 CPXCR1Q8N123 301 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 C11orf49Q9H6J7 331 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 TOMM22Q9NS69 142 aa22.24■■□□□ 1.15
COMMD1-204ENST00000445644 ZBED4O75132 1171 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 CNGA1P29973 690 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 COPB2P35606 906 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 SLC1A4P43007 532 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 STAT2P52630 851 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 TCP11L1Q9NUJ3 509 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 COLQQ9Y215 455 aaPredicted RBP22.23■■□□□ 1.15
COMMD1-204ENST00000445644 ZNF536O15090 1300 aa22.23■■□□□ 1.15
COMMD1-204ENST00000445644 HIP1O00291 1037 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 SLC34A2O95436 690 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 KCTD2Q14681 263 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 PPP4R3BQ5MIZ7 849 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.22■■□□□ 1.15
COMMD1-204ENST00000445644 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 SLC5A4Q9NY91 659 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 LRRC37A2A6NM11 1700 aa22.22■■□□□ 1.15
COMMD1-204ENST00000445644 RANBP2P49792 3224 aaKnown RBP22.21■■□□□ 1.15
COMMD1-204ENST00000445644 DNAJC25-GNG10A0A024R161 153 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 PLA2G6O60733 806 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 HABP4Q5JVS0 413 aaKnown RBP22.21■■□□□ 1.15
COMMD1-204ENST00000445644 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 DSCC1Q9BVC3 393 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 MTMR7Q9Y216 660 aa22.21■■□□□ 1.15
COMMD1-204ENST00000445644 DIS3Q9Y2L1 958 aaKnown RBP22.21■■□□□ 1.15
COMMD1-204ENST00000445644 CEP290O15078 2479 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 EVI5O60447 810 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 OAZ1P54368 228 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 SNAP25P60880 206 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 ANO1Q5XXA6 986 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 FAM160B2Q86V87 743 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 FGD4Q96M96 766 aa22.2■■□□□ 1.14
COMMD1-204ENST00000445644 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
COMMD1-204ENST00000445644 ZNF213O14771 459 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 SEPT4O43236 478 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 MSCO60682 206 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 PCP11498 1178 aaKnown RBP22.19■■□□□ 1.14
COMMD1-204ENST00000445644 TAL1P17542 331 aaPredicted RBP22.19■■□□□ 1.14
COMMD1-204ENST00000445644 TTBK2Q6IQ55 1244 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 CHURC1Q8WUH1 139 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 AGBL1Q96MI9 1066 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 TINF2Q9BSI4 451 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 PRO3102Q9H379 93 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 PRR12Q9ULL5 1215 aa22.19■■□□□ 1.14
COMMD1-204ENST00000445644 TOP1P11387 765 aaKnown RBP22.18■■□□□ 1.14
COMMD1-204ENST00000445644 CHRDL2Q6WN34 429 aa22.18■■□□□ 1.14
COMMD1-204ENST00000445644 DCAF4Q8WV16 495 aa22.18■■□□□ 1.14
COMMD1-204ENST00000445644 ZKSCAN3Q9BRR0 538 aa22.18■■□□□ 1.14
COMMD1-204ENST00000445644 CTDP1Q9Y5B0 961 aaPredicted RBP22.18■■□□□ 1.14
COMMD1-204ENST00000445644 NR2E3Q9Y5X4 410 aa22.18■■□□□ 1.14
COMMD1-204ENST00000445644 ZNF865P0CJ78 1059 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-204ENST00000445644 FDX1P10109 184 aa22.17■■□□□ 1.14
COMMD1-204ENST00000445644 IKQ13123 557 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-204ENST00000445644 C7orf61Q8IZ16 206 aa22.17■■□□□ 1.14
COMMD1-204ENST00000445644 CHST13Q8NET6 341 aa22.17■■□□□ 1.14
COMMD1-204ENST00000445644 RNF41Q9H4P4 317 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-204ENST00000445644 HOMER2Q9NSB8 354 aa22.17■■□□□ 1.14
COMMD1-204ENST00000445644 PCDH10Q9P2E7 1040 aa22.17■■□□□ 1.14
COMMD1-204ENST00000445644 FRMPD2Q68DX3 1309 aaPredicted RBP22.16■■□□□ 1.14
COMMD1-204ENST00000445644 PDHBP11177 359 aa22.16■■□□□ 1.14
COMMD1-204ENST00000445644 CHMLP26374 656 aa22.16■■□□□ 1.14
COMMD1-204ENST00000445644 SLC16A2P36021 539 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms