RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
HCFC1-203ENST00000444191 NAA15Q9BXJ9 866 aaKnown RBP13.03□□□□□ -0.32
HCFC1-203ENST00000444191 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
HCFC1-203ENST00000444191 ADD3Q9UEY8 706 aaKnown RBP13.03□□□□□ -0.32
HCFC1-203ENST00000444191 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
HCFC1-203ENST00000444191 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
HCFC1-203ENST00000444191 A0A1B0GTH6 734 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 WNT7AO00755 349 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 SCG2P13521 617 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.32
HCFC1-203ENST00000444191 KLK7P49862 253 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.32
HCFC1-203ENST00000444191 DUSP10Q9Y6W6 482 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 AGLP35573 1532 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 MROH5Q6ZUA9 1318 aa13.02□□□□□ -0.32
HCFC1-203ENST00000444191 USP17L8P0C7I0 530 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 LRRC41Q15345 812 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 E2F4Q16254 413 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 TCP11X2Q5H9J9 407 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 MMS19Q96T76 1030 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 ZRANB2O95218 330 aaKnown RBP eCLIP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 TNNI2P48788 182 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 NELFCDQ8IXH7 590 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 SECISBP2LQ93073 1101 aaKnown RBP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
HCFC1-203ENST00000444191 AGPAT5Q9NUQ2 364 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 AKAP12Q02952 1782 aa13.02□□□□□ -0.33
HCFC1-203ENST00000444191 ERVK-24P63145 666 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
HCFC1-203ENST00000444191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
HCFC1-203ENST00000444191 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
HCFC1-203ENST00000444191 PICALMQ13492 652 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 WHAMMP3Q1A5X7 153 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
HCFC1-203ENST00000444191 USP17L3A6NCW0 530 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 USP17L4A6NCW7 530 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 EBAG9O00559 213 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 USP17L1Q7RTZ2 530 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 KLHL7Q8IXQ5 586 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
HCFC1-203ENST00000444191 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 MAGEA1P43355 309 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 PNMA1Q8ND90 353 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 GOLGA6L10A6NI86 522 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 HSF2BPO75031 334 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 MOCS3O95396 460 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 DPYDQ12882 1025 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 ESYT3A0FGR9 886 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 TRAF5O00463 557 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CALM1P0DP23 149 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CALM2P0DP24 149 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CALM3P0DP25 149 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CALML3P27482 149 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 PRDX5P30044 214 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 KCNJ6P48051 423 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 ADGRA1Q86SQ6 560 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 CABP7Q86V35 215 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 TMEM139Q8IV31 216 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 TAF4BQ92750 862 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 ANKZF1Q9H8Y5 726 aa13□□□□□ -0.33
HCFC1-203ENST00000444191 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
HCFC1-203ENST00000444191 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 NCK2O43639 380 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
HCFC1-203ENST00000444191 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 CNOT6LQ96LI5 555 aaKnown RBP12.99□□□□□ -0.33
HCFC1-203ENST00000444191 MLXIPQ9HAP2 919 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 ZNF18P17022 549 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 MCM3P25205 808 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 GGCXP38435 758 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 RAPGEF1Q13905 1077 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 TRIM31Q9BZY9 425 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 CCDC113Q9H0I3 377 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
HCFC1-203ENST00000444191 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms