RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 IRF5Q13568 498 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 TMEM132BQ14DG7 1078 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
HDAC6-211ENST00000443563 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 STAT3P40763 770 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 CAP1Q01518 475 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 PRKCZQ05513 592 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 SLC9C1Q4G0N8 1177 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 GPR142Q7Z601 462 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 CATIPQ7Z7H3 387 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 TRMT44Q8IYL2 757 aaKnown RBP12.67□□□□□ -0.38
HDAC6-211ENST00000443563 REPS2Q8NFH8 660 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 KCNB2Q92953 911 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 ABHD8Q96I13 439 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
HDAC6-211ENST00000443563 TEX13BQ9BXU2 312 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 PORCNQ9H237 461 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 PNMA2Q9UL42 364 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
HDAC6-211ENST00000443563 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-211ENST00000443563 SLC15A5A6NIM6 579 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PEX10O60683 326 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
HDAC6-211ENST00000443563 ERCC3P19447 782 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PTPREP23469 700 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PSMA5P28066 241 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 LIFRP42702 1097 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 FLT3LGP49771 235 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 ANTXR2P58335 489 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
HDAC6-211ENST00000443563 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
HDAC6-211ENST00000443563 CHST3Q7LGC8 479 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 NCAPG2Q86XI2 1143 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 ABRAQ8N0Z2 381 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 USP26Q9BXU7 913 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 FBXO40Q9UH90 709 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-211ENST00000443563 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 GABRQQ9UN88 632 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
HDAC6-211ENST00000443563 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 CALM1P0DP23 149 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 CALM2P0DP24 149 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 CALM3P0DP25 149 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 FCER1AP12319 257 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 GRK4P32298 578 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 RGS2P41220 211 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 MORN1Q5T089 497 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 SLC5A4Q9NY91 659 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 GJD2Q9UKL4 321 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
HDAC6-211ENST00000443563 ZNFX1Q9P2E3 1918 aaKnown RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 ADCY3O60266 1144 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 DDAH1O94760 285 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 SLC16A2P36021 539 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 UBXN2AP68543 259 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 FGD1P98174 961 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 GRB14Q14449 540 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 TTBK2Q6IQ55 1244 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 SYNE3Q6ZMZ3 975 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 CHST13Q8NET6 341 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 RANBP17Q9H2T7 1088 aaKnown RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
HDAC6-211ENST00000443563 MYH6P13533 1939 aa12.64□□□□□ -0.39
HDAC6-211ENST00000443563 ICAM1P05362 532 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 KIF5BP33176 963 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
HDAC6-211ENST00000443563 KCTD2Q14681 263 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 GRM4Q14833 912 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
HDAC6-211ENST00000443563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms