RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PLCD1P51178 756 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 STRBPQ96SI9 672 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 CLSTN2Q9H4D0 955 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLC12A7Q9Y666 1083 aa8.48□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 EEF2P13639 858 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 AKR1B1P15121 316 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 PRIMPOLQ96LW4 560 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 BMP3P12645 472 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 SCRN1Q12765 414 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 BLOC1S2Q6QNY1 142 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 POTEB2H3BUK9 544 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 FIBPO43427 364 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 JAK2O60674 1132 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 PFKFB2O60825 505 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 NR1I2O75469 434 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 TRIM29Q14134 588 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 KRT32Q14532 448 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 USH1GQ495M9 461 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 FAM83BQ5T0W9 1011 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC144CPQ8IYA2 1237 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 HHIPL1Q96JK4 782 aa8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC43Q96MW1 224 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-208ENST00000442054 PARP1P09874 1014 aaKnown RBP8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 CDC25BP30305 580 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 TYRO3Q06418 890 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 FAM47CQ5HY64 1035 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 AKNAD1Q5T1N1 836 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 SARM1Q6SZW1 724 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 CHST3Q7LGC8 479 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 RAB11FIP4Q86YS3 637 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 NSUN7Q8NE18 718 aaKnown RBP8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 GTF3C2Q8WUA4 911 aaPredicted RBP8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 GOLPH3LQ9H4A5 285 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 GINM1Q9NU53 330 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 GAKO14976 1311 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 MYPNQ86TC9 1320 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 COL4A1P02462 1669 aa8.46□□□□□ -1.05
CDC42BPA-208ENST00000442054 FCER1AP12319 257 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 FDPSP14324 419 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 STAT3P40763 770 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 CLEC10AQ8IUN9 316 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 NKX2-3Q8TAU0 364 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 FAM200AQ8TCP9 573 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 ANP32BQ92688 251 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 CBX8Q9HC52 389 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 CCPG1Q9ULG6 757 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 PDS5AQ29RF7 1337 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 ADCY3O60266 1144 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 FGAP02671 866 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 XBP1P17861 261 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 CALML3P27482 149 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 MICU3Q86XE3 530 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 TRIM22Q8IYM9 498 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 ACER1Q8TDN7 264 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 RCOR1Q9UKL0 485 aa8.46□□□□□ -1.06
CDC42BPA-208ENST00000442054 F5H6K3 240 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 RHBDL3P58872 404 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 HERVK_113P62684 666 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 KLRC3Q07444 240 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 PKN2Q16513 984 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 ZMYM1Q5SVZ6 1142 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 TCEANC2Q96MN5 208 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 ASCC2Q9H1I8 757 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 FAM53CQ9NYF3 392 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 NR2E3Q9Y5X4 410 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 M0R2C6 588 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 STAT2P52630 851 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 COL13A1Q5TAT6 717 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 EEPD1Q7L9B9 569 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 AGTPBP1Q9UPW5 1226 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 TOP1P11387 765 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 GRK4P32298 578 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 RGS2P41220 211 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 ANKRD1Q15327 319 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 CCDC144BQ3MJ40 725 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 LDLRAD1Q5T700 205 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 TRMT1LQ7Z2T5 733 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 DHX40Q8IX18 779 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 LPAR1Q92633 364 aa8.45□□□□□ -1.06
CDC42BPA-208ENST00000442054 P2RX7Q99572 595 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms