RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 ATG4CQ96DT6 458 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 COG5Q9UP83 839 aa11.17□□□□□ -0.62
ABCF1-203ENST00000441867 SYNRGQ9UMZ2 1314 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 ARVCFO00192 962 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 PGK2P07205 417 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 ACRP10323 421 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 PLCD1P51178 756 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
ABCF1-203ENST00000441867 COG6Q9Y2V7 657 aa11.16□□□□□ -0.62
ABCF1-203ENST00000441867 WDR46O15213 610 aaKnown RBP11.15□□□□□ -0.62
ABCF1-203ENST00000441867 GPR37L1O60883 481 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 GNAI2P04899 355 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-203ENST00000441867 STAT3P40763 770 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 ZAP70P43403 619 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 TFF2Q03403 129 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 GABPAQ06546 454 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 PPP2R2DQ66LE6 453 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 DBNDD2Q9BQY9 259 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 ADAMTS5Q9UNA0 930 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 PCDHA11Q9Y5I1 949 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 SLC4A7Q9Y6M7 1214 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
ABCF1-203ENST00000441867 ASGR1P07306 291 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 KCNQ1P51787 676 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 OS9Q13438 667 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 FAM126BQ8IXS8 530 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 RPUSD2Q8IZ73 545 aaKnown RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 SPICE1Q8N0Z3 855 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 SPOCK2Q92563 424 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
ABCF1-203ENST00000441867 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
ABCF1-203ENST00000441867 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 CABYRO75952 493 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 CYP2C18P33260 490 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 GJA9P57773 515 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-203ENST00000441867 KIAA1755Q5JYT7 1200 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 ZNF467Q7Z7K2 595 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-203ENST00000441867 DDX11Q96FC9 970 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
ABCF1-203ENST00000441867 UPF3AQ9H1J1 476 aaKnown RBP11.13□□□□□ -0.63
ABCF1-203ENST00000441867 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 MCM9Q9NXL9 1143 aa11.13□□□□□ -0.63
ABCF1-203ENST00000441867 ZHX1Q9UKY1 873 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-203ENST00000441867 MAGEB6P1A0A0J9YX57 407 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 VWA5AO00534 786 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 TLL1O43897 1013 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 SNAI1O95863 264 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-203ENST00000441867 CD4P01730 458 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 ICA1Q05084 483 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 ACVR2BQ13705 512 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 ABHD16BQ9H3Z7 469 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 C11orf16Q9NQ32 467 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-203ENST00000441867 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 MTCH2Q9Y6C9 303 aa11.12□□□□□ -0.63
ABCF1-203ENST00000441867 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
ABCF1-203ENST00000441867 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
ABCF1-203ENST00000441867 NKX3-2P78367 333 aa11.11□□□□□ -0.63
ABCF1-203ENST00000441867 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
ABCF1-203ENST00000441867 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
ABCF1-203ENST00000441867 HLA-CQ95604 372 aa11.11□□□□□ -0.63
ABCF1-203ENST00000441867 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
ABCF1-203ENST00000441867 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms