RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TRIM44Q96DX7 344 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-210ENST00000441703 C12orf42Q96LP6 360 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 TBC1D32Q96NH3 1257 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 NOL10Q9BSC4 688 aaKnown RBP7.75□□□□□ -1.17
HDAC6-210ENST00000441703 PANK2Q9BZ23 570 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 SPATC1LQ9H0A9 340 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 DHX36Q9H2U1 1008 aaKnown RBP7.75□□□□□ -1.17
HDAC6-210ENST00000441703 UPF2Q9HAU5 1272 aaKnown RBP7.75□□□□□ -1.17
HDAC6-210ENST00000441703 CNPY2Q9Y2B0 182 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 SYNRGQ9UMZ2 1314 aa7.75□□□□□ -1.17
HDAC6-210ENST00000441703 CACNA1GO43497 2377 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 GPR75-ASB3A0A0A6YYF3 556 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 ASGR1P07306 291 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 C6orf222P0C671 652 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-210ENST00000441703 FCER1AP12319 257 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 ACTN1P12814 892 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 VCAM1P19320 739 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 CDK7P50613 346 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 GSTO1P78417 241 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 TAP1Q03518 808 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 CCDC173Q0VFZ6 552 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 ATP2B3Q16720 1220 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 SLC4A10Q6U841 1118 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 ABRAQ8N0Z2 381 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 GDPD5Q8WTR4 605 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 SLC9A7Q96T83 725 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 TINF2Q9BSI4 451 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 MROH8Q9H579 483 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 RPAP3Q9H6T3 665 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-210ENST00000441703 LMCD1Q9NZU5 365 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 FAM184BQ9ULE4 1060 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 CHD7Q9P2D1 2997 aa7.74□□□□□ -1.17
HDAC6-210ENST00000441703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 HLA-DOAP06340 250 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 PFKMP08237 780 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 PHKA1P46020 1223 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 RFX5P48382 616 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 JAG1P78504 1218 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 TCF15Q12870 199 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 SHROOM1Q2M3G4 852 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 IER5LQ5T953 404 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 ATF7IPQ6VMQ6 1270 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 ZSCAN30Q86W11 494 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 KLHDC9Q8NEP7 349 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 MMP19Q99542 508 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 HOXC10Q9NYD6 342 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 FBXO3Q9UK99 471 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 ZHX1Q9UKY1 873 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 CIZ1Q9ULV3 898 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 UMODL1Q5DID0 1318 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 BRWD1Q9NSI6 2320 aa7.73□□□□□ -1.17
HDAC6-210ENST00000441703 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-210ENST00000441703 SOWAHBA6NEL2 793 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 CIAO1O76071 339 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 GH2P01242 217 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 CD4P01730 458 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-210ENST00000441703 TAL1P17542 331 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-210ENST00000441703 MECOMQ03112 1051 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 SLFN5Q08AF3 891 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 RASGRF1Q13972 1273 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 COG2Q14746 738 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 RAB3GAP1Q15042 981 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 EP400NLQ6ZTU2 488 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 FOXP4Q8IVH2 680 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-210ENST00000441703 PHOSPHO2Q8TCD6 241 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 COL26A1Q96A83 441 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 SLKQ9H2G2 1235 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-210ENST00000441703 PRKAG3Q9UGI9 489 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 REV3LO60673 3130 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 CACNA1BQ00975 2339 aa7.72□□□□□ -1.17
HDAC6-210ENST00000441703 MYADML2A6NDP7 307 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 H3BQ06 376 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 LPXNO60711 386 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 DUSP11O75319 330 aaKnown RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 SEC24BO95487 1268 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 SLC25A27O95847 323 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 CST5P28325 142 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 ZP2Q05996 745 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 TTLL4Q14679 1199 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 KCTD2Q14681 263 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 GNASQ5JWF2 1037 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 CCDC102BQ68D86 513 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 CCSAPQ6IQ19 270 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 BMP8AQ7Z5Y6 402 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 DEFB128Q7Z7B8 93 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 HERC6Q8IVU3 1022 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 ADHFE1Q8IWW8 467 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 MB21D1Q8N884 522 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 SCLYQ96I15 445 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 POP1Q99575 1024 aaKnown RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
HDAC6-210ENST00000441703 KIAA1683Q9H0B3 1180 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 DNAJC18Q9H819 358 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms