RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TAF1P21675 1872 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 CCDC196A0A1B0GTZ2 297 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 AGPSO00116 658 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 PSMD14O00487 310 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 SLC5A1P13866 664 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 TM4SF1P30408 202 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 IARSP41252 1262 aaKnown RBP13.36□□□□□ -0.27
LTBR-203ENST00000441074 GRIN1Q05586 938 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 NOSTRINQ8IVI9 506 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
LTBR-203ENST00000441074 PHKBQ93100 1093 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
LTBR-203ENST00000441074 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 GOLGA6CA6NDK9 693 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 ZBTB43O43298 467 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 GOLGA6DP0CG33 693 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 MAP2K2P36507 400 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 MNAT1P51948 309 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 RPS8P62241 208 aaKnown RBP13.36□□□□□ -0.27
LTBR-203ENST00000441074 NTRK3Q16288 839 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 GOLGA6AQ9NYA3 693 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 NID2Q14112 1375 aa13.36□□□□□ -0.27
LTBR-203ENST00000441074 CCDC172P0C7W6 258 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 TRIM14Q14142 442 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 KCNV1Q6PIU1 500 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 TBC1D10CQ8IV04 446 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 BSDC1Q9NW68 430 aaPredicted RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 AKAP11Q9UKA4 1901 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 INPP5BP32019 993 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 ALX1Q15699 326 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 PAPD7Q5XG87 772 aaKnown RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 PRR5LQ6MZQ0 368 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CCNI2Q6ZMN8 369 aaPredicted RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 CYB5R4Q7L1T6 521 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CNPY4Q8N129 248 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 SLF1Q9BQI6 1058 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 CAPS2Q9BXY5 557 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 NYXQ9GZU5 481 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
LTBR-203ENST00000441074 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 ZNF532Q9HCE3 1301 aa13.35□□□□□ -0.27
LTBR-203ENST00000441074 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.27
LTBR-203ENST00000441074 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
LTBR-203ENST00000441074 LIFRP42702 1097 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 STX17P56962 302 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 RILPL1Q5EBL4 403 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 SELENOOQ9BVL4 669 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 HAUS4Q9H6D7 363 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 DONSONQ9NYP3 566 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 CEP83Q9Y592 693 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 LRRC10BA6NIK2 292 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
LTBR-203ENST00000441074 DDR1Q08345 913 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 SAFBQ15424 915 aaKnown RBP eCLIP13.34□□□□□ -0.27
LTBR-203ENST00000441074 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 ABCF2Q9UG63 623 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 LIMA1Q9UHB6 759 aaKnown RBP13.34□□□□□ -0.27
LTBR-203ENST00000441074 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 EPN1Q9Y6I3 576 aaPredicted RBP13.34□□□□□ -0.27
LTBR-203ENST00000441074 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
LTBR-203ENST00000441074 ATXN2Q99700 1313 aaKnown RBP13.33□□□□□ -0.27
LTBR-203ENST00000441074 GOLGA6BA6NDN3 693 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 ZBTB7AO95365 584 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 RXRAP19793 462 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 CNNM2Q9H8M5 875 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
LTBR-203ENST00000441074 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
LTBR-203ENST00000441074 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms