RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 ZNF326Q5BKZ1 582 aaKnown RBP4.63□□□□□ -1.67
LINC01549-201ENST00000440664 UBXN11Q5T124 520 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 CDCP2Q5VXM1 449 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 PHACTR4Q8IZ21 702 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 ENOX1Q8TC92 643 aaKnown RBP4.63□□□□□ -1.67
LINC01549-201ENST00000440664 ZNF296Q8WUU4 475 aaPredicted RBP4.63□□□□□ -1.67
LINC01549-201ENST00000440664 BRMS1Q9HCU9 246 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 SMPD4Q9NXE4 827 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 GMIPQ9P107 970 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 ADAMTS1Q9UHI8 967 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 PCDHB14Q9Y5E9 798 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 PCDHA11Q9Y5I1 949 aa4.63□□□□□ -1.67
LINC01549-201ENST00000440664 TLR3O15455 904 aaKnown RBP4.62□□□□□ -1.67
LINC01549-201ENST00000440664 TNNI2P48788 182 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 TEKQ02763 1124 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 MLECQ14165 292 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 HS2ST1Q7LGA3 356 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 LILRA2Q8N149 483 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 REXO1Q8N1G1 1221 aaKnown RBP4.62□□□□□ -1.67
LINC01549-201ENST00000440664 GIPC2Q8TF65 315 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 CNNM2Q9H8M5 875 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 EBF1Q9UH73 591 aa4.62□□□□□ -1.67
LINC01549-201ENST00000440664 FITM1A5D6W6 292 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 MEIS3P2A8K0S8 358 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 PDE6BP35913 854 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 ACVRL1P37023 503 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 CCNFP41002 786 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 RNF4P78317 190 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 ARSHQ5FYA8 562 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 NBPF12Q5TAG4 269 aaPredicted RBP4.61□□□□□ -1.67
LINC01549-201ENST00000440664 OVOS1Q6IE37 1185 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 USP51Q70EK9 711 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 SYTL5Q8TDW5 730 aaPredicted RBP4.61□□□□□ -1.67
LINC01549-201ENST00000440664 LINC01599Q8WXQ3 324 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 DHX38Q92620 1227 aaKnown RBP4.61□□□□□ -1.67
LINC01549-201ENST00000440664 G6PC3Q9BUM1 346 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 NT5C1AQ9BXI3 368 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 HDAC8Q9BY41 377 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.61□□□□□ -1.67
LINC01549-201ENST00000440664 GGT7Q9UJ14 662 aa4.61□□□□□ -1.67
LINC01549-201ENST00000440664 LTKP29376 864 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 GBP1P32455 592 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 ATXN1P54253 815 aaKnown RBP4.6□□□□□ -1.67
LINC01549-201ENST00000440664 CLCQ05315 142 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 NMIQ13287 307 aaPredicted RBP4.6□□□□□ -1.67
LINC01549-201ENST00000440664 NBPF9Q3BBW0 867 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 TIGD5Q53EQ6 642 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 SLITRK4Q8IW52 837 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 OXR1Q8N573 874 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 USHBP1Q8N6Y0 703 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 DAGLBQ8NCG7 672 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 ATG4CQ96DT6 458 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 ZNF552Q9H707 407 aaPredicted RBP4.6□□□□□ -1.67
LINC01549-201ENST00000440664 CWC22Q9HCG8 908 aaKnown RBP4.6□□□□□ -1.67
LINC01549-201ENST00000440664 UBP1Q9NZI7 540 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
LINC01549-201ENST00000440664 C1QTNF3-AMACRE9PGA6 284 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 TNFRSF10CO14798 259 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 RAG1P15918 1043 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 ZNF16P17020 682 aaPredicted RBP4.59□□□□□ -1.67
LINC01549-201ENST00000440664 CHRNEQ04844 493 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 RNF111Q6ZNA4 994 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 NLRC3Q7RTR2 1065 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 ANKS4BQ8N8V4 417 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 SHISA4Q96DD7 197 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 C19orf44Q9H6X5 657 aa4.59□□□□□ -1.67
LINC01549-201ENST00000440664 NOTOA8MTQ0 251 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 NME1P15531 152 aaKnown RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 POLR2BP30876 1174 aaKnown RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 ZNF165P49910 485 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 DUSP4Q13115 394 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 SNX17Q15036 470 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 CLEC16AQ2KHT3 1053 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 SEZ6Q53EL9 994 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 CPZQ66K79 652 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 SPPL2CQ8IUH8 684 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 Q8N1X5 172 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 ZNF655Q8N720 491 aaPredicted RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 LINC00116Q8NCU8 138 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 TCTN2Q96GX1 697 aa4.58□□□□□ -1.68
LINC01549-201ENST00000440664 INTS4Q96HW7 963 aaKnown RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 EAF1Q96JC9 268 aaPredicted RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 YBX2Q9Y2T7 364 aaKnown RBP4.58□□□□□ -1.68
LINC01549-201ENST00000440664 TMEM82A0PJX8 343 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 SIGLEC6O43699 453 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 APOBRQ0VD83 1088 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 SNW1Q13573 536 aaKnown RBP4.57□□□□□ -1.68
LINC01549-201ENST00000440664 LRRFIP1Q32MZ4 808 aaKnown RBP4.57□□□□□ -1.68
LINC01549-201ENST00000440664 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 GK5Q6ZS86 529 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 TMC3Q7Z5M5 1100 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 ZNF575Q86XF7 245 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 TMEM192Q8IY95 271 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 NKD1Q969G9 470 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 BCL11AQ9H165 835 aa4.57□□□□□ -1.68
LINC01549-201ENST00000440664 ASCC2Q9H1I8 757 aaPredicted RBP4.57□□□□□ -1.68
LINC01549-201ENST00000440664 FZD7O75084 574 aa4.56□□□□□ -1.68
LINC01549-201ENST00000440664 EFEMP2O95967 443 aa4.56□□□□□ -1.68
LINC01549-201ENST00000440664 KIR2DL1P43626 348 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms