RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ATRNL1Q5VV63 1379 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 B4E1Z4 1266 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC192P0DO97 292 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 RXRAP19793 462 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CNGA1P29973 690 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 GUCY1A2P33402 732 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 COL9A3Q14050 684 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC96Q2M329 555 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ADCK5Q3MIX3 580 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 DHX32Q7L7V1 743 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 NCAPG2Q86XI2 1143 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC83Q8IWF9 413 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 MAP7D2Q96T17 732 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 AS3MTQ9HBK9 375 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 GPCPD1Q9NPB8 672 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF112Q9UJU3 913 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 TACC3Q9Y6A5 838 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 A0A0G2JLL6 359 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 GOLGA6L6A8MZA4 724 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 FOXP2O15409 715 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ALDH1A1P00352 501 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 FLT3LGP49771 235 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 NT5C2P49902 561 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 INHBEP58166 350 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 LACTBP83111 547 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 EXOSC10Q01780 885 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ST3GAL1Q11201 340 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 TRIM32Q13049 653 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC174Q6PII3 467 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 FASTKD5Q7L8L6 764 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 PRRT2Q7Z6L0 340 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CTU1Q7Z7A3 348 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ATG4CQ96DT6 458 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 PARK7Q99497 189 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 HPS5Q9UPZ3 1129 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CTDP1Q9Y5B0 961 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 MYH1P12882 1939 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 NID2Q14112 1375 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF213O14771 459 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 PGK2P07205 417 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 RASA1P20936 1047 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CDC25BP30305 580 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 HERVK_113P62684 666 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 PDE4BQ07343 736 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 NOL8Q76FK4 1167 aaKnown RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 TBC1D10CQ8IV04 446 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF396Q96N95 335 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 ARPP21Q9UBL0 812 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-203ENST00000439962 AGTPBP1Q9UPW5 1226 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CNPY2Q9Y2B0 182 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 OTOFQ9HC10 1997 aa5.49□□□□□ -1.53
EDEM3-203ENST00000439962 CDK5RAP2Q96SN8 1893 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MAST2Q6P0Q8 1798 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 POTEFA5A3E0 1075 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 CPA1P15085 419 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 EN2P19622 333 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 OSBPP22059 807 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MOGSQ13724 837 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 CCL14Q16627 93 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MFSD6Q6ZSS7 791 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 CMTR1Q8N1G2 835 aaKnown RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MYL10Q9BUA6 226 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 UBA5Q9GZZ9 404 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RNF208Q9H0X6 261 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 ARHGEF10LQ9HCE6 1279 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 GPHNQ9NQX3 736 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RBM27Q9P2N5 1060 aaKnown RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 ZSWIM8A7E2V4 1837 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 NEDD4P46934 1319 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 TMEM232C9JQI7 657 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 F5H6K3 240 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 CXCL11O14625 94 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RRP9O43818 475 aaKnown RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 LARGE1O95461 756 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RCAN1P53805 252 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 GABPAQ06546 454 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 KLRC3Q07444 240 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RESTQ13127 1097 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 PRAMEF19Q5SWL8 479 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 USP17L2Q6R6M4 530 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 TMEM179Q6ZVK1 233 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 C16orf86Q6ZW13 317 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 EEPD1Q7L9B9 569 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 SIAH1Q8IUQ4 282 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 FAM200AQ8TCP9 573 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 ZFP91Q96JP5 570 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 NUP62CLQ9H1M0 184 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 CLSTN2Q9H4D0 955 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RAVER2Q9HCJ3 691 aaKnown RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 RTN4Q9NQC3 1192 aaKnown RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 PRDM10Q9NQV6 1147 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 KCNH4Q9UQ05 1017 aa5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MORC2Q9Y6X9 1032 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-203ENST00000439962 MYPNQ86TC9 1320 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms