RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 TMEM67Q5HYA8 995 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 FAM160B2Q86V87 743 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 IGDCC4Q8TDY8 1250 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 GPHNQ9NQX3 736 aaPredicted RBP22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 SNX14Q9Y5W7 946 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 PTCH2Q9Y6C5 1203 aa22.82■■□□□ 1.24
SEMA3B-206ENST00000439487 PLA2G6O60733 806 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 ZBED4O75132 1171 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 GOLGA8HP0CJ92 632 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 MAPK4P31152 587 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 SLC16A2P36021 539 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 ZNF543Q08ER8 600 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 KRT32Q14532 448 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 WDR78Q5VTH9 848 aa22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 CTDP1Q9Y5B0 961 aaPredicted RBP22.81■■□□□ 1.24
SEMA3B-206ENST00000439487 HTTP42858 3142 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 EPB41L2O43491 1005 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 PRMT2P55345 433 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 GPR142Q7Z601 462 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 PLEKHH3Q7Z736 793 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 LRRC2Q9BYS8 371 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 SLC38A10Q9HBR0 1119 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 CWC22Q9HCG8 908 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 ZNF214Q9UL59 606 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 PRR12Q9ULL5 1215 aa22.8■■□□□ 1.24
SEMA3B-206ENST00000439487 STAT3P40763 770 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 FLT3LGP49771 235 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 SNAP25P60880 206 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 BTNL9Q6UXG8 535 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 CPXCR1Q8N123 301 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 LY9Q9HBG7 655 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 RAVER2Q9HCJ3 691 aaKnown RBP22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 HPS5Q9UPZ3 1129 aa22.79■■□□□ 1.24
SEMA3B-206ENST00000439487 SH2B2O14492 632 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 ERCC3P19447 782 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 SLC4A3P48751 1232 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 SYDE2Q5VT97 1194 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 NCAPG2Q86XI2 1143 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 SHCBP1Q8NEM2 672 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 RAET1EQ8TD07 263 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 ABHD8Q96I13 439 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 TMEM87BQ96K49 555 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 TCEANC2Q96MN5 208 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 MTA3Q9BTC8 594 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 GJD2Q9UKL4 321 aa22.78■■□□□ 1.24
SEMA3B-206ENST00000439487 EXOSC10Q01780 885 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 GPATCH4Q5T3I0 446 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 DHX32Q7L7V1 743 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 RIOX2Q8IUF8 465 aa22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 JAKMIP1Q96N16 626 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 UBA5Q9GZZ9 404 aa22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 CPVLQ9H3G5 476 aa22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 PLXNA1Q9UIW2 1896 aa22.77■■□□□ 1.24
SEMA3B-206ENST00000439487 CENPFP49454 3210 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 SEC24BO95487 1268 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 SLC25A27O95847 323 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 PARP1P09874 1014 aaKnown RBP22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 FDX1P10109 184 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 CPA1P15085 419 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 SNRNP48Q6IEG0 339 aaKnown RBP22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 CCDC174Q6PII3 467 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 NUDT12Q9BQG2 462 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 TEX13BQ9BXU2 312 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 PCDH10Q9P2E7 1040 aa22.76■■□□□ 1.23
SEMA3B-206ENST00000439487 PTPREP23469 700 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 ASPRV1Q53RT3 343 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 NFXL1Q6ZNB6 911 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 CATIPQ7Z7H3 387 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 STAG2Q8N3U4 1231 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 MROH8Q9H579 483 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 RIPK3Q9Y572 518 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 IVNS1ABPQ9Y6Y0 642 aa22.75■■□□□ 1.23
SEMA3B-206ENST00000439487 KIAA0100Q14667 2235 aaKnown RBP22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 ATP2A1O14983 1001 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 HMGB1P09429 215 aaKnown RBP22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 CYP2B6P20813 491 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 OAZ1P54368 228 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 IRF5Q13568 498 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 C8orf34Q49A92 452 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 MORN1Q5T089 497 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 TMTC2Q8N394 836 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 AGBL1Q96MI9 1066 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 RANBP17Q9H2T7 1088 aaKnown RBP22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 MAD2L2Q9UI95 211 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 ZNF536O15090 1300 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 WDR19Q8NEZ3 1342 aa22.74■■□□□ 1.23
SEMA3B-206ENST00000439487 CCDC69A6NI79 296 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 SLC15A5A6NIM6 579 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 ADCY3O60266 1144 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 LIFRP42702 1097 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 TROAPQ12815 778 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 GRM4Q14833 912 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 SLC9C1Q4G0N8 1177 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 BLOC1S2Q6QNY1 142 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 SH3TC2Q8TF17 1288 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 NUP133Q8WUM0 1156 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 SOCS4Q8WXH5 440 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 USP6NLQ92738 828 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms