RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
LSM1P1-201ENST00000438629 ANGEL1Q9UNK9 670 aaKnown RBP5.7□□□□□ -1.5
LSM1P1-201ENST00000438629 AKT3Q9Y243 479 aa5.7□□□□□ -1.5
LSM1P1-201ENST00000438629 U3KQE9 123 aa5.7□□□□□ -1.5
LSM1P1-201ENST00000438629 ITGB7P26010 798 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 GRB10Q13322 594 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 BMS1Q14692 1282 aaKnown RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 ZMYM1Q5SVZ6 1142 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 ANGEL2Q5VTE6 544 aaKnown RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 MRM1Q6IN84 353 aaKnown RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 RNF111Q6ZNA4 994 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 CREG2Q8IUH2 290 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 BCL7CQ8WUZ0 217 aaPredicted RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 BRF1Q92994 677 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 PPP1R14AQ96A00 147 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 TCTN2Q96GX1 697 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 CCDC120Q96HB5 630 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 NOL6Q9H6R4 1146 aaKnown RBP5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 PCMTD2Q9NV79 361 aa5.69□□□□□ -1.5
LSM1P1-201ENST00000438629 WNT11O96014 354 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 SPINK2P20155 84 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 LTKP29376 864 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 BMP8BP34820 402 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 IKZF1Q13422 519 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 RASA3Q14644 834 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 SLC10A6Q3KNW5 377 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 ZC3H12BQ5HYM0 836 aaKnown RBP5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 LINC00116Q8NCU8 138 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 ADCY4Q8NFM4 1077 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 CCDC140Q96MF4 163 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 ATP13A1Q9HD20 1204 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 CCDC39Q9UFE4 941 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 EMC9Q9Y3B6 208 aa5.68□□□□□ -1.5
LSM1P1-201ENST00000438629 SHISA3A0PJX4 238 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 MED26O95402 600 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 RBM10P98175 930 aaKnown RBP5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 AMPD2Q01433 879 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 SSRP1Q08945 709 aaKnown RBP5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 LRP8Q14114 963 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 PPP2R5DQ14738 602 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 LONRF2Q1L5Z9 754 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 USHBP1Q8N6Y0 703 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 ZNF513Q8N8E2 541 aaPredicted RBP5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 AGBL5Q8NDL9 886 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 DNAJC7Q99615 494 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 CGGBP1Q9UFW8 167 aaPredicted RBP5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
LSM1P1-201ENST00000438629 FAM221BA6H8Z2 402 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 MEIS1O00470 390 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 ITGAVP06756 1048 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 SYPP08247 313 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 VAV1P15498 845 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 HOXC12P31275 282 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 EGR3Q06889 387 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 BNIP3Q12983 259 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 TRIM59Q8IWR1 403 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 FLCNQ8NFG4 579 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 MRGPRX3Q96LB0 322 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 IPO9Q96P70 1041 aaKnown RBP5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 APEX2Q9UBZ4 518 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
LSM1P1-201ENST00000438629 KCNH1O95259 989 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 ESR1P03372 595 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 CD8BP10966 210 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 ZP2Q05996 745 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 ZNF227Q86WZ6 799 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 SLC26A8Q96RN1 970 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 CYP26B1Q9NR63 512 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 PCDHA11Q9Y5I1 949 aa5.65□□□□□ -1.5
LSM1P1-201ENST00000438629 KDM2BQ8NHM5 1336 aa5.65□□□□□ -1.51
LSM1P1-201ENST00000438629 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 CCDC163A0A0D9SF12 145 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 SCO2A0A1W2PP80 73 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 A0A1W2PQU0 124 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 H0Y8X5 98 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 HYAL3O43820 417 aaPredicted RBP5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 ZNF205O95201 554 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 CPP00450 1065 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 CTSKP43235 329 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 SLC23A3Q6PIS1 610 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 SPRED2Q7Z698 418 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 TP53INP2Q8IXH6 220 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 ZBTB38Q8NAP3 1195 aaPredicted RBP5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 PI4K2BQ8TCG2 481 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 FOXP3Q9BZS1 431 aa5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 CARS2Q9HA77 564 aaKnown RBP5.64□□□□□ -1.51
LSM1P1-201ENST00000438629 TRBV23OR9-2A0A075B6M9 112 aa5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 WASH4PA8MWX3 477 aa5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 CD3EP07766 207 aa5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 FUT4P22083 530 aa5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 RPL10P27635 214 aaKnown RBP5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 PPP2R2AP63151 447 aa5.63□□□□□ -1.51
LSM1P1-201ENST00000438629 DUSP4Q13115 394 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms