RNA–Protein interactions for RNA: ENST00000438274.7

BECN1-202, Transcript of beclin 1, humanhuman

TSL 2 BASIC

Gene BECN1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-202ENST00000438274 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 ANKRD23Q86SG2 305 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
BECN1-202ENST00000438274 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 FLOT1O75955 427 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 AK2P54819 239 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
BECN1-202ENST00000438274 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 TROAPQ12815 778 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 PABPC4Q13310 644 aaKnown RBP eCLIP11.12□□□□□ -0.63
BECN1-202ENST00000438274 APOA5Q6Q788 366 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 SYNE3Q6ZMZ3 975 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 AGXT2Q9BYV1 514 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 FBXO28Q9NVF7 368 aa11.12□□□□□ -0.63
BECN1-202ENST00000438274 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 ZBTB43O43298 467 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 PARP1P09874 1014 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 SNHG28P0DPA3 235 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 HSPA8P11142 646 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 HOXA7P31268 230 aaPredicted RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 TTBK2Q6IQ55 1244 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 P2RX7Q99572 595 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 RNF186Q9NXI6 227 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 BAZ2BQ9UIF8 2168 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 TRPA1O75762 1119 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 DDAH1O94760 285 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 OSBPP22059 807 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 SLC16A2P36021 539 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 STAT2P52630 851 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 LBX1P52954 281 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 STK3Q13188 491 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 COG2Q14746 738 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 GRM4Q14833 912 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 SMCR8Q8TEV9 937 aaPredicted RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
BECN1-202ENST00000438274 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 MAD2L2Q9UI95 211 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
BECN1-202ENST00000438274 PARP14Q460N5 1801 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 GOLGA8AA7E2F4 631 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 KLRF2D3W0D1 207 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 ST18O60284 1047 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 CALM1P0DP23 149 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 CALM2P0DP24 149 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 CALM3P0DP25 149 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 METAP2P50579 478 aaKnown RBP eCLIP11.1□□□□□ -0.63
BECN1-202ENST00000438274 HERVK_113P62684 666 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
BECN1-202ENST00000438274 ASPRV1Q53RT3 343 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 GPATCH4Q5T3I0 446 aaKnown RBP11.1□□□□□ -0.63
BECN1-202ENST00000438274 CMTR1Q8N1G2 835 aaKnown RBP11.1□□□□□ -0.63
BECN1-202ENST00000438274 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 ALDH8A1Q9H2A2 487 aaPredicted RBP11.1□□□□□ -0.63
BECN1-202ENST00000438274 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
BECN1-202ENST00000438274 FEM1BQ9UK73 627 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
BECN1-202ENST00000438274 RLFQ13129 1914 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 PEX10O60683 326 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 PDIA3P30101 505 aaKnown RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 KIF5BP33176 963 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 CRHR2Q13324 411 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 RTN1Q16799 776 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 COL13A1Q5TAT6 717 aaPredicted RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
BECN1-202ENST00000438274 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 CHURC1Q8WUH1 139 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
BECN1-202ENST00000438274 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms