RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TRIM75PA6NK02 468 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 FZD9O00144 591 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 ERCC4Q92889 916 aaPredicted RBP24.19■■□□□ 1.46
PTPRF-207ENST00000436724 MKL1Q969V6 931 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 SPON1Q9HCB6 807 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 NAPAP54920 295 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 FKBP1CQ5VVH2 108 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 SAMD7Q7Z3H4 446 aa24.19■■□□□ 1.46
PTPRF-207ENST00000436724 KRI1Q8N9T8 703 aaKnown RBP24.19■■□□□ 1.46
PTPRF-207ENST00000436724 FBXO2Q9UK22 296 aaPredicted RBP24.19■■□□□ 1.46
PTPRF-207ENST00000436724 ZNF174Q15697 407 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 MICALL2Q8IY33 904 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 ADGRF4Q8IZF3 695 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 CCDC148Q8NFR7 591 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 M0R2N6 131 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 CUTAO60888 179 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 CCDC192P0DO97 292 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 ZNF280AP59817 542 aaPredicted RBP24.18■■□□□ 1.46
PTPRF-207ENST00000436724 JMJD4Q9H9V9 463 aa24.18■■□□□ 1.46
PTPRF-207ENST00000436724 NOL7Q9UMY1 257 aaKnown RBP24.18■■□□□ 1.46
PTPRF-207ENST00000436724 ASTN2O75129 1339 aaPredicted RBP24.17■■□□□ 1.46
PTPRF-207ENST00000436724 ZNF202O95125 648 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 PTPREP23469 700 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 TYRO3Q06418 890 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 TTC38Q5R3I4 469 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 FAM83AQ86UY5 434 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 FHDC1Q9C0D6 1143 aaPredicted RBP24.17■■□□□ 1.46
PTPRF-207ENST00000436724 PCDHA6Q9UN73 950 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 PCDHA8Q9Y5H6 950 aa24.17■■□□□ 1.46
PTPRF-207ENST00000436724 RPS12P25398 132 aaKnown RBP24.16■■□□□ 1.46
PTPRF-207ENST00000436724 TBC1D10BQ4KMP7 808 aaPredicted RBP24.16■■□□□ 1.46
PTPRF-207ENST00000436724 GPATCH4Q5T3I0 446 aaKnown RBP24.16■■□□□ 1.46
PTPRF-207ENST00000436724 RESP18Q5W5W9 173 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 ZSCAN30Q86W11 494 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.16■■□□□ 1.46
PTPRF-207ENST00000436724 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 CEP131Q9UPN4 1083 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 A0A1W2PRG0 241 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 SLC1A4P43007 532 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 SLFN13Q68D06 897 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 COA7Q96BR5 231 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 ZMYND12Q9H0C1 365 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 CNOT7Q9UIV1 285 aaKnown RBP24.16■■□□□ 1.46
PTPRF-207ENST00000436724 HPSEQ9Y251 543 aa24.16■■□□□ 1.46
PTPRF-207ENST00000436724 SMCO2A6NFE2 343 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 NUP88Q99567 741 aaPredicted RBP24.15■■□□□ 1.46
PTPRF-207ENST00000436724 SDF4Q9BRK5 362 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 USP17L10C9JJH3 530 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 F5H6K3 240 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 KLRC3Q07444 240 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 RASA3Q14644 834 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 ARHGAP27Q6ZUM4 889 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 DAGLBQ8NCG7 672 aa24.15■■□□□ 1.46
PTPRF-207ENST00000436724 A0A087WWV3 80 aa24.14■■□□□ 1.45
PTPRF-207ENST00000436724 HS1BP3Q53T59 392 aa24.14■■□□□ 1.45
PTPRF-207ENST00000436724 SRPRBQ9Y5M8 271 aaKnown RBP24.14■■□□□ 1.45
PTPRF-207ENST00000436724 PPP1R11O60927 126 aaPredicted RBP24.13■■□□□ 1.45
PTPRF-207ENST00000436724 MCM7P33993 719 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 ECE1P42892 770 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 SYKP43405 635 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 CCDC194A0A1B0GVG4 234 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 CTAGE5O15320 804 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 PTGDRQ13258 359 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 GALNT17Q6IS24 598 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 SASS6Q6UVJ0 657 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 CCDC12Q8WUD4 166 aaPredicted RBP24.13■■□□□ 1.45
PTPRF-207ENST00000436724 DPF2Q92785 391 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 CSRNP2Q9H175 543 aa24.13■■□□□ 1.45
PTPRF-207ENST00000436724 NDUFB10O96000 172 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 INF2Q27J81 1249 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 USP49Q70CQ1 688 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 SPICE1Q8N0Z3 855 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 ACER1Q8TDN7 264 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 DCAF4Q8WV16 495 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 C6orf50Q9HD87 102 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 ZBTB21Q9ULJ3 1066 aa24.12■■□□□ 1.45
PTPRF-207ENST00000436724 PNMA6FA0A0J9YX94 578 aa24.11■■□□□ 1.45
PTPRF-207ENST00000436724 FAM237AA0A1B0GTK4 181 aa24.11■■□□□ 1.45
PTPRF-207ENST00000436724 TRAPPC10P48553 1259 aa24.11■■□□□ 1.45
PTPRF-207ENST00000436724 ANO6Q4KMQ2 910 aa24.11■■□□□ 1.45
PTPRF-207ENST00000436724 NAP1L5Q96NT1 182 aaPredicted RBP24.11■■□□□ 1.45
PTPRF-207ENST00000436724 KCNH3Q9ULD8 1083 aa24.11■■□□□ 1.45
PTPRF-207ENST00000436724 TBC1D12O60347 775 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 GMCL1P1Q8NEA9 526 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 GNA11P29992 359 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 TNNI2P48788 182 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 TEPSINQ96N21 525 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 BIN2Q9UBW5 565 aaPredicted RBP24.1■■□□□ 1.45
PTPRF-207ENST00000436724 HACL1Q9UJ83 578 aa24.1■■□□□ 1.45
PTPRF-207ENST00000436724 ZBTB5O15062 677 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 ATP2C1P98194 919 aaPredicted RBP24.09■■□□□ 1.45
PTPRF-207ENST00000436724 KIF4BQ2VIQ3 1234 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 KIAA1755Q5JYT7 1200 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 CCDC84Q86UT8 332 aaPredicted RBP24.09■■□□□ 1.45
PTPRF-207ENST00000436724 MTMR8Q96EF0 704 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 TMEM260Q9NX78 707 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 LONRF3Q496Y0 759 aa24.09■■□□□ 1.45
PTPRF-207ENST00000436724 FAM177A1Q8N128 213 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms