RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 PIGSQ96S52 555 aa24.71■■□□□ 1.55
YBX1-203ENST00000436427 TANGO6Q9C0B7 1094 aa24.71■■□□□ 1.55
YBX1-203ENST00000436427 SEC63Q9UGP8 760 aaKnown RBP24.71■■□□□ 1.55
YBX1-203ENST00000436427 NUCB2P80303 420 aa24.7■■□□□ 1.54
YBX1-203ENST00000436427 SYDE2Q5VT97 1194 aa24.7■■□□□ 1.54
YBX1-203ENST00000436427 SAMD1Q6SPF0 538 aaPredicted RBP24.7■■□□□ 1.54
YBX1-203ENST00000436427 C12orf42Q96LP6 360 aa24.7■■□□□ 1.54
YBX1-203ENST00000436427 RPAP3Q9H6T3 665 aaPredicted RBP24.7■■□□□ 1.54
YBX1-203ENST00000436427 JMJD4Q9H9V9 463 aa24.7■■□□□ 1.54
YBX1-203ENST00000436427 FEM1BQ9UK73 627 aa24.7■■□□□ 1.54
YBX1-203ENST00000436427 SCG2P13521 617 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 HUNKP57058 714 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 TRIM29Q14134 588 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 PFKFB3Q16875 520 aaPredicted RBP24.69■■□□□ 1.54
YBX1-203ENST00000436427 SH3D19Q5HYK7 790 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 BTNL9Q6UXG8 535 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 CHURC1Q8WUH1 139 aa24.69■■□□□ 1.54
YBX1-203ENST00000436427 BAZ2BQ9UIF8 2168 aaKnown RBP24.69■■□□□ 1.54
YBX1-203ENST00000436427 CXCL11O14625 94 aa24.68■■□□□ 1.54
YBX1-203ENST00000436427 GUCY1B3Q02153 619 aa24.68■■□□□ 1.54
YBX1-203ENST00000436427 FOXD4L5Q5VV16 416 aaPredicted RBP24.68■■□□□ 1.54
YBX1-203ENST00000436427 FAM160B2Q86V87 743 aa24.68■■□□□ 1.54
YBX1-203ENST00000436427 FOXD4L4Q8WXT5 416 aaPredicted RBP24.68■■□□□ 1.54
YBX1-203ENST00000436427 KIFC2Q96AC6 838 aa24.68■■□□□ 1.54
YBX1-203ENST00000436427 GJB4Q9NTQ9 266 aa24.68■■□□□ 1.54
YBX1-203ENST00000436427 GJA5P36382 358 aa24.67■■□□□ 1.54
YBX1-203ENST00000436427 GADL1Q6ZQY3 521 aa24.67■■□□□ 1.54
YBX1-203ENST00000436427 FBXO28Q9NVF7 368 aa24.67■■□□□ 1.54
YBX1-203ENST00000436427 PRR12Q9ULL5 1215 aa24.67■■□□□ 1.54
YBX1-203ENST00000436427 KCNH4Q9UQ05 1017 aa24.67■■□□□ 1.54
YBX1-203ENST00000436427 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
YBX1-203ENST00000436427 A0A0G2JLL6 359 aaPredicted RBP24.66■■□□□ 1.54
YBX1-203ENST00000436427 PLA2G6O60733 806 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 PDIA4P13667 645 aaKnown RBP24.66■■□□□ 1.54
YBX1-203ENST00000436427 XBP1P17861 261 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 OTUD7BQ6GQQ9 843 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 HEATR3Q7Z4Q2 680 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 PRRT2Q7Z6L0 340 aaPredicted RBP24.66■■□□□ 1.54
YBX1-203ENST00000436427 GPKOWQ92917 476 aaPredicted RBP eCLIP24.66■■□□□ 1.545e-8■■■□□ 19.1
YBX1-203ENST00000436427 WNK4Q96J92 1243 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 VPS54Q9P1Q0 977 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 PTPRFP10586 1907 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 FLOT1O75955 427 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 MKRN3Q13064 507 aaKnown RBP24.66■■□□□ 1.54
YBX1-203ENST00000436427 CDC37Q16543 378 aaPredicted RBP24.66■■□□□ 1.54
YBX1-203ENST00000436427 SLF1Q9BQI6 1058 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 MTMR6Q9Y217 621 aa24.66■■□□□ 1.54
YBX1-203ENST00000436427 PNMA6FA0A0J9YX94 578 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 ZBTB5O15062 677 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 BRD1O95696 1058 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 SNAP25P60880 206 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 SNAPC2Q13487 334 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 FBXO18Q8NFZ0 1043 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 MTMR8Q96EF0 704 aa24.65■■□□□ 1.54
YBX1-203ENST00000436427 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.53
YBX1-203ENST00000436427 NBR1Q14596 966 aa24.64■■□□□ 1.53
YBX1-203ENST00000436427 KRT40Q6A162 431 aa24.64■■□□□ 1.53
YBX1-203ENST00000436427 WWC2Q6AWC2 1192 aa24.64■■□□□ 1.53
YBX1-203ENST00000436427 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.53
YBX1-203ENST00000436427 ZDHHC9Q9Y397 364 aa24.64■■□□□ 1.53
YBX1-203ENST00000436427 FSTL1Q12841 308 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 QRICH1Q2TAL8 776 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 TREML2Q5T2D2 321 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 SAPCD2Q86UD0 394 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 PRPF38AQ8NAV1 312 aaKnown RBP24.63■■□□□ 1.53
YBX1-203ENST00000436427 KCNJ14Q9UNX9 436 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 LOC285556D6RIA3 1793 aa24.63■■□□□ 1.53
YBX1-203ENST00000436427 USP17L15C9J2P7 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L13C9JLJ4 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L11C9JVI0 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L18D6R9N7 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L22D6RA61 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L17D6RBQ6 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L19D6RCP7 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L20D6RJB6 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 ZNF157P51786 506 aaPredicted RBP24.62■■□□□ 1.53
YBX1-203ENST00000436427 USP17L24Q0WX57 530 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 MCTP1Q6DN14 999 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 BARHL2Q9NY43 387 aa24.62■■□□□ 1.53
YBX1-203ENST00000436427 SPRYD7Q5W111 196 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 CATSPERGQ6ZRH7 1159 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 FASTKD5Q7L8L6 764 aaKnown RBP24.61■■□□□ 1.53
YBX1-203ENST00000436427 FERMT3Q86UX7 667 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 PPP1R9AQ9ULJ8 1098 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 ABT1Q9ULW3 272 aaKnown RBP24.61■■□□□ 1.53
YBX1-203ENST00000436427 TMEM88BA6NKF7 163 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 STXBP3O00186 592 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 PPP1R11O60927 126 aaPredicted RBP24.61■■□□□ 1.53
YBX1-203ENST00000436427 ZBTB48P10074 688 aaPredicted RBP24.61■■□□□ 1.53
YBX1-203ENST00000436427 GTF2A2P52657 109 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 NAPAP54920 295 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 CCDC174Q6PII3 467 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 SHISA4Q96DD7 197 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 RANBP17Q9H2T7 1088 aaKnown RBP24.61■■□□□ 1.53
YBX1-203ENST00000436427 SH3GLB2Q9NR46 395 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 TLL2Q9Y6L7 1015 aa24.61■■□□□ 1.53
YBX1-203ENST00000436427 hCG_1984214I3L0E3 225 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 F13A1P00488 732 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 MMP1P03956 469 aa24.6■■□□□ 1.53
YBX1-203ENST00000436427 NLRP5P59047 1200 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms