RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
HLA-F-220ENST00000434407 RIOX2Q8IUF8 465 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 PNMA1Q8ND90 353 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 RAET1EQ8TD07 263 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 PXYLP1Q8TE99 480 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 ZNF236Q9UL36 1845 aa21.56■■□□□ 1.04
HLA-F-220ENST00000434407 REC8O95072 547 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 SLC25A27O95847 323 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 ERCC3P19447 782 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 STAT3P40763 770 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 CCAR1Q8IX12 1150 aaKnown RBP21.55■■□□□ 1.04
HLA-F-220ENST00000434407 IGDCC4Q8TDY8 1250 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 SOCS4Q8WXH5 440 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 KIFC2Q96AC6 838 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 NUDT12Q9BQG2 462 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 MROH8Q9H579 483 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 KAT14Q9H8E8 782 aa21.55■■□□□ 1.04
HLA-F-220ENST00000434407 SLC15A5A6NIM6 579 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 ZBED4O75132 1171 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 XRCC5P13010 732 aaKnown RBP21.54■■□□□ 1.04
HLA-F-220ENST00000434407 PTPREP23469 700 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 GRK4P32298 578 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 OAZ1P54368 228 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
HLA-F-220ENST00000434407 GRB14Q14449 540 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 PLS1Q14651 629 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 SLC9C1Q4G0N8 1177 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 IFIT1BQ5T764 474 aaKnown RBP21.54■■□□□ 1.04
HLA-F-220ENST00000434407 RASEFQ8IZ41 740 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 SLAIN1Q8ND83 568 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 CHMP4CQ96CF2 233 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 ZNF333Q96JL9 665 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 MTMR7Q9Y216 660 aa21.54■■□□□ 1.04
HLA-F-220ENST00000434407 IFIT3O14879 490 aaKnown RBP21.53■■□□□ 1.04
HLA-F-220ENST00000434407 STRNO43815 780 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 COPB2P35606 906 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 CCDC96Q2M329 555 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 GPATCH4Q5T3I0 446 aaKnown RBP21.53■■□□□ 1.04
HLA-F-220ENST00000434407 IFFO2Q5TF58 517 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 TTBK2Q6IQ55 1244 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 NBPF11Q86T75 865 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 ABRAQ8N0Z2 381 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 TEX13BQ9BXU2 312 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 PRR12Q9ULL5 1215 aa21.53■■□□□ 1.04
HLA-F-220ENST00000434407 ADCY3O60266 1144 aa21.52■■□□□ 1.04
HLA-F-220ENST00000434407 MCM5P33992 734 aa21.52■■□□□ 1.04
HLA-F-220ENST00000434407 HSPA4P34932 840 aa21.52■■□□□ 1.04
HLA-F-220ENST00000434407 SART3Q15020 963 aaKnown RBP21.52■■□□□ 1.04
HLA-F-220ENST00000434407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.52■■□□□ 1.04
HLA-F-220ENST00000434407 CHST3Q7LGC8 479 aa21.52■■□□□ 1.04
HLA-F-220ENST00000434407 ZNF536O15090 1300 aa21.52■■□□□ 1.03
HLA-F-220ENST00000434407 FRMPD2Q68DX3 1309 aaPredicted RBP21.52■■□□□ 1.03
HLA-F-220ENST00000434407 BAZ2BQ9UIF8 2168 aaKnown RBP21.51■■□□□ 1.03
HLA-F-220ENST00000434407 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
HLA-F-220ENST00000434407 HOXC6P09630 235 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
HLA-F-220ENST00000434407 MAP2K5Q13163 448 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 SYDE2Q5VT97 1194 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 SH3TC2Q8TF17 1288 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 SENP2Q9HC62 589 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 GPCPD1Q9NPB8 672 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
HLA-F-220ENST00000434407 IVNS1ABPQ9Y6Y0 642 aa21.51■■□□□ 1.03
HLA-F-220ENST00000434407 ERICH2A1L162 156 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 CCDC85CA6NKD9 419 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 PRC1O43663 620 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 ZKSCAN1P17029 563 aaPredicted RBP21.5■■□□□ 1.03
HLA-F-220ENST00000434407 RGS2P41220 211 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 KRT32Q14532 448 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 WTAPQ15007 396 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 ASPRV1Q53RT3 343 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 TMEM67Q5HYA8 995 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 WDR78Q5VTH9 848 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 SNRNP48Q6IEG0 339 aaKnown RBP21.5■■□□□ 1.03
HLA-F-220ENST00000434407 TMEM87BQ96K49 555 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 USP26Q9BXU7 913 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
HLA-F-220ENST00000434407 LY9Q9HBG7 655 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 CWC22Q9HCG8 908 aaKnown RBP21.5■■□□□ 1.03
HLA-F-220ENST00000434407 RAVER2Q9HCJ3 691 aaKnown RBP21.5■■□□□ 1.03
HLA-F-220ENST00000434407 RIPK3Q9Y572 518 aa21.5■■□□□ 1.03
HLA-F-220ENST00000434407 PLXNA1Q9UIW2 1896 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 MYH6P13533 1939 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 ELNP15502 786 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 CYP2B6P20813 491 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 SLC16A2P36021 539 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 ADCK5Q3MIX3 580 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 NEK1Q96PY6 1258 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 APBA2Q99767 749 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 CTDP1Q9Y5B0 961 aaPredicted RBP21.49■■□□□ 1.03
HLA-F-220ENST00000434407 WDR19Q8NEZ3 1342 aa21.49■■□□□ 1.03
HLA-F-220ENST00000434407 SH2B2O14492 632 aaPredicted RBP21.48■■□□□ 1.03
HLA-F-220ENST00000434407 IGHA2P01877 340 aa21.48■■□□□ 1.03
HLA-F-220ENST00000434407 ADORA2AP29274 412 aa21.48■■□□□ 1.03
HLA-F-220ENST00000434407 LIFRP42702 1097 aa21.48■■□□□ 1.03
HLA-F-220ENST00000434407 EXOSC10Q01780 885 aaKnown RBP21.48■■□□□ 1.03
HLA-F-220ENST00000434407 TROAPQ12815 778 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms