RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 FAM47AQ5JRC9 791 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 GMCL1P1Q8NEA9 526 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 EPB41L4AQ9HCS5 686 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 MTMR4Q9NYA4 1195 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 RLFQ13129 1914 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 SYNGAP1Q96PV0 1343 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 PLIN4Q96Q06 1357 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 M0R2C6 588 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 CEP95Q96GE4 821 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 PRDM5Q9NQX1 630 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 FRMPD3Q5JV73 1810 aa17.69■□□□□ 0.42
RPUSD3-208ENST00000433972 MX1P20591 662 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 ZNF467Q7Z7K2 595 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 SLC17A8Q8NDX2 589 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 CHST13Q8NET6 341 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 SLC38A10Q9HBR0 1119 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 FAM184BQ9ULE4 1060 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 PHF24Q9UPV7 400 aa17.68■□□□□ 0.42
RPUSD3-208ENST00000433972 PRDM1O75626 825 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 TRIM60Q495X7 471 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 CPXCR1Q8N123 301 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 TSEN34Q9BSV6 310 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 STXBP5LQ9Y2K9 1186 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
RPUSD3-208ENST00000433972 ZNF865P0CJ78 1059 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 BMP3P12645 472 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 STAT2P52630 851 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 PPARAQ07869 468 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 ZMYM1Q5SVZ6 1142 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 SLFN13Q68D06 897 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 FAM109BQ6ICB4 259 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 FAM160B2Q86V87 743 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 CHURC1Q8WUH1 139 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 FERMT2Q96AC1 680 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 SPC25Q9HBM1 224 aa17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 ISY1Q9ULR0 285 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-208ENST00000433972 GREB1LQ9C091 1923 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 DNAJC25-GNG10A0A024R161 153 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 MOXD2PA6NHM9 499 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 SLC4A3P48751 1232 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 IRX6P78412 446 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 TFAP4Q01664 338 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 IKQ13123 557 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 LRRC47Q8N1G4 583 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 GMCL1Q96IK5 515 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 MTMR10Q9NXD2 777 aa17.65■□□□□ 0.42
RPUSD3-208ENST00000433972 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 PGK1P00558 417 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 SLC1A4P43007 532 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 EVI5LQ96CN4 794 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 SEC62Q99442 399 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 ABHD16BQ9H3Z7 469 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 PDLIM7Q9NR12 457 aa17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 ZHX1Q9UKY1 873 aaPredicted RBP17.64■□□□□ 0.41
RPUSD3-208ENST00000433972 DNAH12Q6ZR08 3092 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 PARP14Q460N5 1801 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 A0A1W2PQ45 241 aaPredicted RBP17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 A0A1W2PQY0 241 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 CLTBP09497 229 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 TKFCQ3LXA3 575 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 Q7L0L9 218 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 STARD7Q9NQZ5 370 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 RIPK3Q9Y572 518 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 MROH7Q68CQ1 1323 aa17.63■□□□□ 0.41
RPUSD3-208ENST00000433972 DCDC2CA8MYV0 355 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 TMEM232C9JQI7 657 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 PLA2G6O60733 806 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 ADAMTS4O75173 837 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 TAL1P17542 331 aaPredicted RBP17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 TLE2Q04725 743 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 ZNF697Q5TEC3 545 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 STAG1Q8WVM7 1258 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 BADQ92934 168 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
RPUSD3-208ENST00000433972 POTEB2H3BUK9 544 aa17.61■□□□□ 0.41
RPUSD3-208ENST00000433972 RAG1P15918 1043 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms