RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
USP54-206ENST00000433394 CHST7Q9NS84 486 aa8.35□□□□□ -1.07
USP54-206ENST00000433394 GFOD1Q9NXC2 390 aa8.35□□□□□ -1.07
USP54-206ENST00000433394 FAM155AB1AL88 458 aaPredicted RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 EFCAB14O75071 495 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 EOMESO95936 686 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 SNRPB2P08579 225 aaKnown RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 HOXC12P31275 282 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 SOX5P35711 763 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 NOP2P46087 812 aaKnown RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 MASP1P48740 699 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 PABPC4Q13310 644 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP54-206ENST00000433394 DALRD3Q5D0E6 543 aaKnown RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 MFSD4AQ8N468 514 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 CHAC2Q8WUX2 184 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
USP54-206ENST00000433394 RAXQ9Y2V3 346 aa8.34□□□□□ -1.07
USP54-206ENST00000433394 IGF2BP3O00425 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP54-206ENST00000433394 SIGLEC6O43699 453 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 GSNP06396 782 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 GSK3AP49840 483 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 DTWD2Q8NBA8 298 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 BTN2A2Q8WVV5 523 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
USP54-206ENST00000433394 MRGPRX3Q96LB0 322 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 GPATCH2Q9NW75 528 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 SFMBT1Q9UHJ3 866 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 RNF112Q9ULX5 631 aa8.33□□□□□ -1.08
USP54-206ENST00000433394 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 SHOXO15266 292 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 MYCLP1P12525 358 aaPredicted RBP8.32□□□□□ -1.08
USP54-206ENST00000433394 CPEP16870 476 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 NAT1P18440 290 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 GABREP78334 506 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 GTF2IRD2BQ6EKJ0 949 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 C22orf34Q6ZV56 151 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 GTF2IRD2Q86UP8 949 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
USP54-206ENST00000433394 TP53INP1Q96A56 240 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
USP54-206ENST00000433394 METTL22Q9BUU2 404 aaPredicted RBP8.32□□□□□ -1.08
USP54-206ENST00000433394 LEFTY1O75610 366 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 FLT3P36888 993 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 GATA4P43694 442 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 MAP4K2Q12851 820 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
USP54-206ENST00000433394 KRT26Q7Z3Y9 468 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 NKX2-4Q9H2Z4 354 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 CYP26B1Q9NR63 512 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
USP54-206ENST00000433394 INTS7Q9NVH2 962 aaKnown RBP8.31□□□□□ -1.08
USP54-206ENST00000433394 MAGEC2Q9UBF1 373 aaPredicted RBP8.31□□□□□ -1.08
USP54-206ENST00000433394 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 MEIS1O00470 390 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 GSC2O15499 205 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 LRRN2O75325 713 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 PRAMEF1O95521 474 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 ENDOUP21128 410 aaKnown RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 ECI1P42126 302 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 RBM10P98175 930 aaKnown RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 FOXB2Q5VYV0 432 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 WWC2Q6AWC2 1192 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 AHI1Q8N157 1196 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 FBXL6Q8N531 539 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 ZNF655Q8N720 491 aaPredicted RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 ZNF513Q8N8E2 541 aaPredicted RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 CAAP1Q9H8G2 361 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 NDOR1Q9UHB4 597 aa8.3□□□□□ -1.08
USP54-206ENST00000433394 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
USP54-206ENST00000433394 ZNF865P0CJ78 1059 aaPredicted RBP8.29□□□□□ -1.08
USP54-206ENST00000433394 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
USP54-206ENST00000433394 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
USP54-206ENST00000433394 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
USP54-206ENST00000433394 TMC3Q7Z5M5 1100 aa8.29□□□□□ -1.08
USP54-206ENST00000433394 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
USP54-206ENST00000433394 DAGLBQ8NCG7 672 aa8.29□□□□□ -1.08
USP54-206ENST00000433394 PTPRN2Q92932 1015 aa8.29□□□□□ -1.08
USP54-206ENST00000433394 METTL14Q9HCE5 456 aaKnown RBP8.29□□□□□ -1.08
USP54-206ENST00000433394 HMX2A2RU54 273 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 CD3EP07766 207 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
USP54-206ENST00000433394 GRIA2P42262 883 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 SEPHS1P49903 392 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 GFRA1P56159 465 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 CPSF6Q16630 551 aaKnown RBP eCLIP8.28□□□□□ -1.08
USP54-206ENST00000433394 DPY19L1Q2PZI1 675 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 GPAT2Q6NUI2 795 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 PPM1KQ8N3J5 372 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 TMEM151AQ8N4L1 468 aa8.28□□□□□ -1.08
USP54-206ENST00000433394 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms