RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ADAMTS4O75173 837 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 ZFYP08048 801 aaPredicted RBP17.79■□□□□ 0.44
PRKDC-203ENST00000432581 GNAT2P19087 354 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 NUP133Q8WUM0 1156 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 NUP88Q99567 741 aaPredicted RBP17.79■□□□□ 0.44
PRKDC-203ENST00000432581 SEMA6BQ9H3T3 888 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 FAM184BQ9ULE4 1060 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 SYNPO2Q9UMS6 1093 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
PRKDC-203ENST00000432581 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 MOXD2PA6NHM9 499 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 RNF113AO15541 343 aaKnown RBP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 ZNF467Q7Z7K2 595 aaPredicted RBP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 OSBP2Q969R2 916 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 TOX2Q96NM4 488 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
PRKDC-203ENST00000432581 CLIP2Q9UDT6 1046 aa17.78■□□□□ 0.44
PRKDC-203ENST00000432581 IGKV6D-41A0A0C4DH26 115 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 RAG1P15918 1043 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 TDO2P48775 406 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 ACLYP53396 1101 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 ANKRD33Q7Z3H0 272 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
PRKDC-203ENST00000432581 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 KLHDC9Q8NEP7 349 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 MKL1Q969V6 931 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
PRKDC-203ENST00000432581 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 TMEM39AQ9NV64 488 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 FBXO40Q9UH90 709 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
PRKDC-203ENST00000432581 LAMA2P24043 3122 aaKnown RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 TMEM265A0A087WTH1 108 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 GPAA1O43292 621 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 ITGB8P26012 769 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 FPGSQ05932 587 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 KIFC2Q96AC6 838 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 RNPC3Q96LT9 517 aaKnown RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 COL25A1Q9BXS0 654 aaPredicted RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 EPB41L4AQ9HCS5 686 aaPredicted RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
PRKDC-203ENST00000432581 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
PRKDC-203ENST00000432581 UNC80Q8N2C7 3258 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 GREB1LQ9C091 1923 aaPredicted RBP17.75■□□□□ 0.43
PRKDC-203ENST00000432581 DUSP11O75319 330 aaKnown RBP17.75■□□□□ 0.43
PRKDC-203ENST00000432581 TTLL1O95922 423 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 APPP05067 770 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 OAZ1P54368 228 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 ACVR2BQ13705 512 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 KCNA10Q16322 511 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 ANKRD35Q8N283 1001 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 MAFAQ8NHW3 353 aaPredicted RBP17.75■□□□□ 0.43
PRKDC-203ENST00000432581 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 SPC25Q9HBM1 224 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
PRKDC-203ENST00000432581 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
PRKDC-203ENST00000432581 ELP1O95163 1332 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 MROH7Q68CQ1 1323 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 MYH7P12883 1935 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 PRDM1O75626 825 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 FDX1P10109 184 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 CST5P28325 142 aaPredicted RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 FAAP100Q0VG06 881 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 CCSAPQ6IQ19 270 aaPredicted RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 PCSK9Q8NBP7 692 aaKnown RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 GLT1D1Q96MS3 346 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 ABHD16BQ9H3Z7 469 aa17.74■□□□□ 0.43
PRKDC-203ENST00000432581 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
PRKDC-203ENST00000432581 ZNFX1Q9P2E3 1918 aaKnown RBP17.73■□□□□ 0.43
PRKDC-203ENST00000432581 SMCHD1A6NHR9 2005 aa17.73■□□□□ 0.43
PRKDC-203ENST00000432581 PATL2C9JE40 543 aaKnown RBP17.73■□□□□ 0.43
PRKDC-203ENST00000432581 EPHB4P54760 987 aa17.73■□□□□ 0.43
PRKDC-203ENST00000432581 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
PRKDC-203ENST00000432581 PLIN4Q96Q06 1357 aa17.73■□□□□ 0.43
PRKDC-203ENST00000432581 M0R2C6 588 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 TIMP1P01033 207 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 SLC3A2P08195 630 aaKnown RBP17.72■□□□□ 0.43
PRKDC-203ENST00000432581 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
PRKDC-203ENST00000432581 TSPY3P0CV98 308 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 TSPY8P0CW00 308 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 BMP3P12645 472 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms